RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 COL11A1P12107 1806 aaPredicted RBP15.36■□□□□ 0.05
CHD3-206ENST00000452447 A0A0G2JMZ2 1700 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 ADORA2AP29274 412 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
CHD3-206ENST00000452447 PDE1AP54750 535 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 DIS3LQ8TF46 1054 aaKnown RBP15.36■□□□□ 0.05
CHD3-206ENST00000452447 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
CHD3-206ENST00000452447 SLC5A4Q9NY91 659 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 NYAP2Q9P242 653 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 STAP2Q9UGK3 403 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 FBXO28Q9NVF7 368 aa15.35■□□□□ 0.05
CHD3-206ENST00000452447 FLRT1Q9NZU1 646 aa15.35■□□□□ 0.05
CHD3-206ENST00000452447 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
CHD3-206ENST00000452447 F5H6K3 240 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 SLC25A27O95847 323 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 KLRC3Q07444 240 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 PPARAQ07869 468 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 TMEM132BQ14DG7 1078 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 LNPKQ9C0E8 428 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 C11orf49Q9H6J7 331 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
CHD3-206ENST00000452447 DNAH12Q6ZR08 3092 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 VWA5AO00534 786 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 TTLL1O95922 423 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 FCER1AP12319 257 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 CNGA1P29973 690 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 CYP2C19P33261 490 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 ABRAQ8N0Z2 381 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 CEP95Q96GE4 821 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 ADAMTS5Q9UNA0 930 aa15.33■□□□□ 0.05
CHD3-206ENST00000452447 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 MSCO60682 206 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 NDUFB10O96000 172 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 STAT3P40763 770 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 OLFML2BQ68BL8 750 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 LHX8Q68G74 356 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
CHD3-206ENST00000452447 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 MTMR4Q9NYA4 1195 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 ALPK3Q96L96 1907 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 ZNF236Q9UL36 1845 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 COPB2P35606 906 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 TFAP4Q01664 338 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 KCTD2Q14681 263 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 RIOX2Q8IUF8 465 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 NEDD1Q8NHV4 660 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 MKL1Q969V6 931 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 SYNPO2Q9UMS6 1093 aa15.32■□□□□ 0.04
CHD3-206ENST00000452447 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
CHD3-206ENST00000452447 COBLO75128 1261 aa15.31■□□□□ 0.04
CHD3-206ENST00000452447 MNX1P50219 401 aaPredicted RBP15.31■□□□□ 0.04
CHD3-206ENST00000452447 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
CHD3-206ENST00000452447 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
CHD3-206ENST00000452447 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
CHD3-206ENST00000452447 MMP19Q99542 508 aa15.31■□□□□ 0.04
CHD3-206ENST00000452447 DDX20Q9UHI6 824 aaKnown RBP15.31■□□□□ 0.04
CHD3-206ENST00000452447 ZNF214Q9UL59 606 aaPredicted RBP15.31■□□□□ 0.04
CHD3-206ENST00000452447 SMCHD1A6NHR9 2005 aa15.31■□□□□ 0.04
CHD3-206ENST00000452447 FRMPD3Q5JV73 1810 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 PPP4R3BQ5MIZ7 849 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
CHD3-206ENST00000452447 EXOC6Q8TAG9 804 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 RILPL2Q969X0 211 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 KIFC2Q96AC6 838 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 TEX13BQ9BXU2 312 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
CHD3-206ENST00000452447 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 CYBAP13498 195 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 CTDSPL2Q05D32 466 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 CHD1LQ86WJ1 897 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 C7orf61Q8IZ16 206 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 MAML3Q96JK9 1138 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 RBM27Q9P2N5 1060 aaKnown RBP15.29■□□□□ 0.04
CHD3-206ENST00000452447 FEM1BQ9UK73 627 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
CHD3-206ENST00000452447 SZT2Q5T011 3432 aa15.29■□□□□ 0.04
CHD3-206ENST00000452447 FOXP2O15409 715 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 ZBED4O75132 1171 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 IGHDP01880 384 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 PGK2P07205 417 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 SLFN13Q68D06 897 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 SNRNP48Q6IEG0 339 aaKnown RBP15.28■□□□□ 0.04
CHD3-206ENST00000452447 CPXCR1Q8N123 301 aa15.28■□□□□ 0.04
CHD3-206ENST00000452447 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms