RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 ZNF76P36508 570 aa12.6□□□□□ -0.39
DDR1-239ENST00000452441 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
DDR1-239ENST00000452441 FOXP4Q8IVH2 680 aaPredicted RBP12.6□□□□□ -0.39
DDR1-239ENST00000452441 FNBP4Q8N3X1 1017 aaPredicted RBP12.6□□□□□ -0.39
DDR1-239ENST00000452441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.398e-8■■■■□ 25.6
DDR1-239ENST00000452441 BIN2Q9UBW5 565 aaPredicted RBP12.6□□□□□ -0.39
DDR1-239ENST00000452441 RBL2Q08999 1139 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 NCAPHQ15003 741 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 TERF2Q15554 542 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 KCTD19Q17RG1 926 aaPredicted RBP12.59□□□□□ -0.39
DDR1-239ENST00000452441 NEK11Q8NG66 645 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDR1-239ENST00000452441 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.399e-7■■■■□ 24.7
DDR1-239ENST00000452441 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
DDR1-239ENST00000452441 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 CLEC10AQ8IUN9 316 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 IQUBQ8NA54 791 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 TJP1Q07157 1748 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 NTSR2O95665 410 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 CLCN6P51797 869 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 NFIXQ14938 502 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 DTHD1Q6ZMT9 781 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 ENAHQ8N8S7 591 aaPredicted RBP12.59□□□□□ -0.39
DDR1-239ENST00000452441 CCDC43Q96MW1 224 aaKnown RBP12.59□□□□□ -0.39
DDR1-239ENST00000452441 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
DDR1-239ENST00000452441 KIF1AQ12756 1690 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 TECP42680 631 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 WDR24Q96S15 920 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 SEPT11Q9NVA2 429 aaKnown RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 TCERG1LQ5VWI1 586 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDR1-239ENST00000452441 ARFGAP3Q9NP61 516 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 BTDP43251 543 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 GSTO1P78417 241 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 GPS2Q13227 327 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 USP17L2Q6R6M4 530 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 CACNA2D4Q7Z3S7 1137 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 PLA2G12BQ9BX93 195 aa12.58□□□□□ -0.4
DDR1-239ENST00000452441 TTF2Q9UNY4 1162 aaKnown RBP12.58□□□□□ -0.4
DDR1-239ENST00000452441 ANKRD65E5RJM6 399 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 SERPINB2P05120 415 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 FAM207AQ9NSI2 230 aaPredicted RBP12.57□□□□□ -0.4
DDR1-239ENST00000452441 ZNF446Q9NWS9 450 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 VPS18Q9P253 973 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 A0A0U1RQJ8 604 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 IFNAR1P17181 557 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 CUL4BQ13620 913 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 PRKG1Q13976 671 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 STAG2Q8N3U4 1231 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 GJA10Q969M2 543 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 ZBTB22O15209 634 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
DDR1-239ENST00000452441 BPIFA3Q9BQP9 254 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 CRACR2AQ9BSW2 395 aa12.57□□□□□ -0.4
DDR1-239ENST00000452441 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
DDR1-239ENST00000452441 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 PDE4DQ08499 809 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 PKD1L3Q7Z443 1732 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 DPP8Q6V1X1 898 aaPredicted RBP12.56□□□□□ -0.4
DDR1-239ENST00000452441 FCHSD1Q86WN1 690 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 EYA3Q99504 573 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 ARHGAP6O43182 974 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 AKR1B10O60218 316 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 CALM1P0DP23 149 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 CALM2P0DP24 149 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 CALM3P0DP25 149 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 SLC16A2P36021 539 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 LRRC41Q15345 812 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 USH1GQ495M9 461 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 L2HGDHQ9H9P8 463 aa12.56□□□□□ -0.4
DDR1-239ENST00000452441 IKBKBO14920 756 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 TBC1D8BQ0IIM8 1120 aa12.55□□□□□ -0.4
DDR1-239ENST00000452441 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms