RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
USP54-207ENST00000451492 ZNF287Q9HBT7 754 aa11.52□□□□□ -0.57
USP54-207ENST00000451492 INCENPQ9NQS7 918 aa11.52□□□□□ -0.57
USP54-207ENST00000451492 MTMR7Q9Y216 660 aa11.52□□□□□ -0.57
USP54-207ENST00000451492 TSPY2A6NKD2 308 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 SGPL1O95470 568 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 ERCC3P19447 782 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 HAND2P61296 217 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 TFAP4Q01664 338 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 MAP2K5Q13163 448 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 MCMDC2Q4G0Z9 681 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
USP54-207ENST00000451492 MORN1Q5T089 497 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 DPF3Q92784 378 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
USP54-207ENST00000451492 PAK6Q9NQU5 681 aaPredicted RBP11.51□□□□□ -0.57
USP54-207ENST00000451492 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
USP54-207ENST00000451492 NDUFB10O96000 172 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 PTPREP23469 700 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 ADORA2AP29274 412 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 CCND3P30281 292 aaPredicted RBP11.5□□□□□ -0.57
USP54-207ENST00000451492 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
USP54-207ENST00000451492 TMEM132BQ14DG7 1078 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 NPLOC4Q8TAT6 608 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 DIS3LQ8TF46 1054 aaKnown RBP11.5□□□□□ -0.57
USP54-207ENST00000451492 FLRT1Q9NZU1 646 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 NYAP2Q9P242 653 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 RPTORQ8N122 1335 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 PLIN4Q96Q06 1357 aa11.5□□□□□ -0.57
USP54-207ENST00000451492 IGKV6D-41A0A0C4DH26 115 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 F5H6K3 240 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
USP54-207ENST00000451492 NMT2O60551 498 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 TTLL1O95922 423 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 HSPD1P10809 573 aaKnown RBP11.49□□□□□ -0.57
USP54-207ENST00000451492 SDSP20132 328 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 CNGA1P29973 690 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 KLRC3Q07444 240 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 IKQ13123 557 aaPredicted RBP11.49□□□□□ -0.57
USP54-207ENST00000451492 GRB14Q14449 540 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 CWC27Q6UX04 472 aaKnown RBP11.49□□□□□ -0.57
USP54-207ENST00000451492 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 DPP9Q86TI2 863 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 MB21D1Q8N884 522 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 USP6NLQ92738 828 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 KIFC2Q96AC6 838 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
USP54-207ENST00000451492 TACC3Q9Y6A5 838 aa11.49□□□□□ -0.57
USP54-207ENST00000451492 MCM3APO60318 1980 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 DNAH12Q6ZR08 3092 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 XRCC5P13010 732 aaKnown RBP11.48□□□□□ -0.57
USP54-207ENST00000451492 PDE4AP27815 886 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 CYP2C19P33261 490 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 SLFN13Q68D06 897 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 TRMT44Q8IYL2 757 aaKnown RBP11.48□□□□□ -0.57
USP54-207ENST00000451492 NEDD1Q8NHV4 660 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 PAWRQ96IZ0 340 aaKnown RBP11.48□□□□□ -0.57
USP54-207ENST00000451492 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
USP54-207ENST00000451492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP54-207ENST00000451492 MYH6P13533 1939 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 VWA5AO00534 786 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 FGAP02671 866 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 PGK2P07205 417 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 MFSD14CQ5VZR4 134 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
USP54-207ENST00000451492 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 MMP19Q99542 508 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
USP54-207ENST00000451492 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 COBLO75128 1261 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
USP54-207ENST00000451492 FCER1AP12319 257 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 BMP3P12645 472 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
USP54-207ENST00000451492 STAT3P40763 770 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 MFAP1P55081 439 aaKnown RBP11.46□□□□□ -0.57
USP54-207ENST00000451492 CCDC96Q2M329 555 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 MAP3K21Q5TCX8 1036 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 SHCBP1Q8NEM2 672 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 MROH8Q9H579 483 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 RAVER2Q9HCJ3 691 aaKnown RBP11.46□□□□□ -0.57
USP54-207ENST00000451492 HOMER2Q9NSB8 354 aa11.46□□□□□ -0.57
USP54-207ENST00000451492 ZNF214Q9UL59 606 aaPredicted RBP11.46□□□□□ -0.57
USP54-207ENST00000451492 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 LCTP09848 1927 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 NEDD4P46934 1319 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 H0YGN5 161 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 ZBED4O75132 1171 aa11.45□□□□□ -0.58
USP54-207ENST00000451492 SLC25A27O95847 323 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms