RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ICA1Q05084 483 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 NPY5RQ15761 445 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
USP39-207ENST00000450066 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 SYT17Q9BSW7 474 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 SPTLC2O15270 562 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 CALML3P27482 149 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 SF3A1Q15459 793 aaKnown RBP16.41■□□□□ 0.22
USP39-207ENST00000450066 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
USP39-207ENST00000450066 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
USP39-207ENST00000450066 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
USP39-207ENST00000450066 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 GH2P01242 217 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 NLRP5P59047 1200 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 MAP3K10Q02779 954 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
USP39-207ENST00000450066 SAMD7Q7Z3H4 446 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 BICD2Q8TD16 824 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 BARHL2Q9NY43 387 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
USP39-207ENST00000450066 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
USP39-207ENST00000450066 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
USP39-207ENST00000450066 LIG1P18858 919 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
USP39-207ENST00000450066 JAG1P78504 1218 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 WWC2Q6AWC2 1192 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 ADALQ6DHV7 355 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 GPC2Q8N158 579 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 CCDC148Q8NFR7 591 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 GPKOWQ92917 476 aaPredicted RBP eCLIP16.39■□□□□ 0.21
USP39-207ENST00000450066 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
USP39-207ENST00000450066 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
USP39-207ENST00000450066 SYCE3A1L190 88 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 H7C1D1 291 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 RASA3Q14644 834 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 PTPAQ15257 358 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
USP39-207ENST00000450066 GALNT17Q6IS24 598 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 CDAN1Q8IWY9 1227 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 DCAF4Q8WV16 495 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 UBA5Q9GZZ9 404 aa16.39■□□□□ 0.21
USP39-207ENST00000450066 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
USP39-207ENST00000450066 A0A1W2PQ27 194 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 A0A1W2PQ64 194 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 A0A1W2PQD8 194 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 STXBP3O00186 592 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 PPP6R2O75170 966 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 KIF4BQ2VIQ3 1234 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 HEATR3Q7Z4Q2 680 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 GMCL1P1Q8NEA9 526 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 LRSAM1Q6UWE0 723 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
USP39-207ENST00000450066 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
USP39-207ENST00000450066 DACT1Q9NYF0 836 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 PCDHA4Q9UN74 947 aa16.38■□□□□ 0.21
USP39-207ENST00000450066 hCG_1984214I3L0E3 225 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 SLFN13Q68D06 897 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
USP39-207ENST00000450066 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 ZNF713Q8N859 430 aaPredicted RBP16.37■□□□□ 0.21
USP39-207ENST00000450066 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 TEPSINQ96N21 525 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 PIGSQ96S52 555 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 GPRC5DQ9NZD1 345 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 HACL1Q9UJ83 578 aa16.37■□□□□ 0.21
USP39-207ENST00000450066 NR1I2O75469 434 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 SLC1A4P43007 532 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
USP39-207ENST00000450066 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 GMCL1Q96IK5 515 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 CEP131Q9UPN4 1083 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 SBF1O95248 1867 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 F5H6K3 240 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 KLRC3Q07444 240 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 EARS2Q5JPH6 523 aaKnown RBP16.36■□□□□ 0.21
USP39-207ENST00000450066 AXDND1Q5T1B0 1012 aaPredicted RBP16.36■□□□□ 0.21
USP39-207ENST00000450066 KCTD1Q719H9 257 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 ZMYND12Q9H0C1 365 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
USP39-207ENST00000450066 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
USP39-207ENST00000450066 CAP2P40123 477 aa16.35■□□□□ 0.21
USP39-207ENST00000450066 TRAPPC10P48553 1259 aa16.35■□□□□ 0.21
USP39-207ENST00000450066 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms