RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 ASCC2Q9H1I8 757 aaPredicted RBP11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 RNF41Q9H4P4 317 aaPredicted RBP11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 TOMM22Q9NS69 142 aa11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 ANAPC4Q9UJX5 808 aa11.33□□□□□ -0.6
SSU72P1-201ENST00000449911 TSPY2A6NKD2 308 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 ZNF213O14771 459 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 FOXP2O15409 715 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 RAD21O60216 631 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 BCRP11274 1271 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 PCP11498 1178 aaKnown RBP11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 EEF2P13639 858 aaKnown RBP11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 HOXD10P28358 340 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 FCGRTP55899 365 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 HERVK_113P62684 666 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 CTDSPL2Q05D32 466 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 FAM110CQ1W6H9 321 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 CASC1Q6TDU7 716 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 OTOP1Q7RTM1 612 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 PLPP6Q8IY26 295 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 ANKRD13CQ8N6S4 541 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 DSCC1Q9BVC3 393 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
SSU72P1-201ENST00000449911 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 RANBP6O60518 1105 aaKnown RBP11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 TTLL1O95922 423 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 CHMLP26374 656 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 PSMC4P43686 418 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 NT5C2P49902 561 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 PRMT2P55345 433 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 TFAP4Q01664 338 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 IMMTQ16891 758 aaKnown RBP11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 BMP2KLQ5H9B9 411 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 MFSD6Q6ZSS7 791 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 CCAR1Q8IX12 1150 aaKnown RBP11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 PPP4R2Q9NY27 417 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
SSU72P1-201ENST00000449911 TNPO2O14787 897 aaKnown RBP11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 ORC4O43929 436 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 HAND2P61296 217 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 DSG2Q14126 1118 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 FAM47AQ5JRC9 791 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 RRP12Q5JTH9 1297 aaKnown RBP11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 SYNPO2Q9UMS6 1093 aa11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
SSU72P1-201ENST00000449911 FLOT1O75955 427 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 CCNA1P78396 465 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 AKNAD1Q5T1N1 836 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 ESR2Q92731 530 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 COA7Q96BR5 231 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 PAGR1Q9BTK6 254 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 ARHGAP39Q9C0H5 1083 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 MTMR4Q9NYA4 1195 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 HOXC10Q9NYD6 342 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 MORF4L1Q9UBU8 362 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 STX8Q9UNK0 236 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 PTPN22Q9Y2R2 807 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 MYPNQ86TC9 1320 aa11.29□□□□□ -0.6
SSU72P1-201ENST00000449911 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 SGSM2O43147 1006 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 COG2Q14746 738 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 SLC9C1Q4G0N8 1177 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 RAET1EQ8TD07 263 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 CNNM2Q9H8M5 875 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 SRRDQ9UH36 339 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 GREB1LQ9C091 1923 aaPredicted RBP11.28□□□□□ -0.6
SSU72P1-201ENST00000449911 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
SSU72P1-201ENST00000449911 F5H6K3 240 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms