RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 C7orf61Q8IZ16 206 aa12.91□□□□□ -0.34
SRRT-205ENST00000449389 NYAP2Q9P242 653 aa12.91□□□□□ -0.34
SRRT-205ENST00000449389 PPP1R9AQ9ULJ8 1098 aa12.91□□□□□ -0.34
SRRT-205ENST00000449389 ADAMTS5Q9UNA0 930 aa12.91□□□□□ -0.34
SRRT-205ENST00000449389 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 IGHA2P01877 340 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 COL6A1P12109 1028 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 FCER1AP12319 257 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 CNGA1P29973 690 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 CYP2C19P33261 490 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 COPB2P35606 906 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 ZMYM1Q5SVZ6 1142 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
SRRT-205ENST00000449389 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
SRRT-205ENST00000449389 DDX20Q9UHI6 824 aaKnown RBP12.9□□□□□ -0.34
SRRT-205ENST00000449389 GREB1LQ9C091 1923 aaPredicted RBP12.9□□□□□ -0.35
SRRT-205ENST00000449389 PFASO15067 1338 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 VWA5AO00534 786 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 COBLO75128 1261 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 SLC3A2P08195 630 aaKnown RBP12.89□□□□□ -0.35
SRRT-205ENST00000449389 CYBAP13498 195 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 HDAC1Q13547 482 aaPredicted RBP12.89□□□□□ -0.35
SRRT-205ENST00000449389 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 RIOX2Q8IUF8 465 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 SEC62Q99442 399 aaKnown RBP12.89□□□□□ -0.35
SRRT-205ENST00000449389 NAPBQ9H115 298 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
SRRT-205ENST00000449389 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 F5H6K3 240 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 PRDM1O75626 825 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 STAT3P40763 770 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 PDE4BQ07343 736 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 KLRC3Q07444 240 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 AAMPQ13685 434 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 KCTD2Q14681 263 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 TRPV1Q8NER1 839 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
SRRT-205ENST00000449389 ZMYND8Q9ULU4 1186 aaPredicted RBP12.88□□□□□ -0.35
SRRT-205ENST00000449389 PARP14Q460N5 1801 aa12.88□□□□□ -0.35
SRRT-205ENST00000449389 PLIN4Q96Q06 1357 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 NDUFB10O96000 172 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 PPARAQ07869 468 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 REPS2Q8NFH8 660 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 MKL1Q969V6 931 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 MMP19Q99542 508 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
SRRT-205ENST00000449389 GDF15Q99988 308 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 STAP2Q9UGK3 403 aa12.87□□□□□ -0.35
SRRT-205ENST00000449389 DNM1LO00429 736 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 SEPT4O43236 478 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 TTLL1O95922 423 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 BMP8BP34820 402 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
SRRT-205ENST00000449389 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 NRBP1Q9UHY1 535 aa12.86□□□□□ -0.35
SRRT-205ENST00000449389 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
SRRT-205ENST00000449389 ATP2A1O14983 1001 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 ZBED4O75132 1171 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 SYN1P17600 705 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 PDE1AP54750 535 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 TFAP4Q01664 338 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 LRRC26Q2I0M4 334 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
SRRT-205ENST00000449389 TICAM2Q86XR7 235 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
SRRT-205ENST00000449389 SENP6Q9GZR1 1112 aaPredicted RBP12.85□□□□□ -0.35
SRRT-205ENST00000449389 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 CTDP1Q9Y5B0 961 aaPredicted RBP12.85□□□□□ -0.35
SRRT-205ENST00000449389 FRMPD3Q5JV73 1810 aa12.85□□□□□ -0.35
SRRT-205ENST00000449389 KBTBD13C9JR72 458 aa12.84□□□□□ -0.35
SRRT-205ENST00000449389 FOXP2O15409 715 aa12.84□□□□□ -0.35
SRRT-205ENST00000449389 PGK2P07205 417 aa12.84□□□□□ -0.35
SRRT-205ENST00000449389 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
SRRT-205ENST00000449389 LRRC47Q8N1G4 583 aaKnown RBP12.84□□□□□ -0.35
SRRT-205ENST00000449389 TINF2Q9BSI4 451 aa12.84□□□□□ -0.35
SRRT-205ENST00000449389 HELLSQ9NRZ9 838 aa12.84□□□□□ -0.35
SRRT-205ENST00000449389 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
SRRT-205ENST00000449389 COL11A1P12107 1806 aaPredicted RBP12.83□□□□□ -0.35
SRRT-205ENST00000449389 FDX1P10109 184 aa12.83□□□□□ -0.36
SRRT-205ENST00000449389 BMP3P12645 472 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms