RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CXCL11O14625 94 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 SP100P23497 879 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 STAT2P52630 851 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 MB21D1Q8N884 522 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 SDR42E1Q8WUS8 393 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CCDC171Q6TFL3 1326 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLC8A3P57103 927 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 TSHZ3Q63HK5 1081 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 GINM1Q9NU53 330 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 INPP5FQ9Y2H2 1132 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 NUB1Q9Y5A7 615 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 PPP2R2DQ66LE6 453 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 CHRDL2Q6WN34 429 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SCYL3Q8IZE3 742 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PHKBQ93100 1093 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 NAP1L5Q96NT1 182 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLF1Q9BQI6 1058 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 TMEM39BQ9GZU3 492 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PDE4AP27815 886 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 BFSP2Q13515 415 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SNRNP48Q6IEG0 339 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM122AQ96E09 287 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 C8orf76Q96K31 380 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 EGFRP00533 1210 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM160B1Q5W0V3 765 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 GOLGA1Q92805 767 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM84BQ96KN1 310 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 AMNQ9BXJ7 453 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLC4A7Q9Y6M7 1214 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 ZNF536O15090 1300 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 IPO7O95373 1038 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 ADORA1P30542 326 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 UBA7P41226 1012 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PRMT2P55345 433 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 UBE3CQ15386 1083 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 MCTP2Q6DN12 878 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 IL31Q6EBC2 164 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 HAUS6Q7Z4H7 955 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 C12orf50Q8NA57 414 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 RNF34Q969K3 372 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 ADPGKQ9BRR6 497 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SEPT11Q9NVA2 429 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 USP18Q9UMW8 372 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 MROH7-TTC4A0A0A0MT08 1334 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLC25A27O95847 323 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 HMGN5P82970 282 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PPARAQ07869 468 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PPP2R5BQ15173 497 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM47AQ5JRC9 791 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PCSK9Q8NBP7 692 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 OR6J1Q8NGC5 347 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 EDC3Q96F86 508 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 KIF9Q9HAQ2 790 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PCDHB7Q9Y5E2 793 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PCDHA1Q9Y5I3 950 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SNAP23O00161 211 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SUPT20HL2P0C7V6 817 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 IFRD2Q12894 506 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 MTMR2Q13614 643 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 PLEKHH3Q7Z736 793 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SESTD1Q86VW0 696 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 SUGCTQ9HAC7 445 aa6.38□□□□□ -1.39
CDC42BPA-209ENST00000448940 ATP5JP18859 108 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLC7A5P2Q9GIP4 190 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SDK1Q7Z5N4 2213 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SPDYE2BA6NHP3 402 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 TLL1O43897 1013 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SPDYE6P0CI01 402 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 NAP1L1P55209 391 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 CEP57Q86XR8 500 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 PROM2Q8N271 834 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 PRPF38AQ8NAV1 312 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 JPH2Q9BR39 696 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 ORC3Q9UBD5 711 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 BECN2A8MW95 431 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 MSCO60682 206 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 CYP2E1P05181 493 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 PDE1AP54750 535 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 RAB11FIP4Q86YS3 637 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM49AQ9H0Q0 323 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SYNCQ9H7C4 482 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 POLLQ9UGP5 575 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 DAGLAQ9Y4D2 1042 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 NWD1Q149M9 1564 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 MICAL3Q7RTP6 2002 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM196BA6NMK8 535 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 XRCC6P12956 609 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 TTLL4Q14679 1199 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 NAA30Q147X3 362 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 IFT74Q96LB3 600 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 PLEKHF1Q96S99 279 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 NRBP2Q9NSY0 501 aa6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 G3BP2Q9UN86 482 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-209ENST00000448940 DOLKQ9UPQ8 538 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms