RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 RARBP10826 455 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 ADCYAP1R1P41586 468 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 TMEM132BQ14DG7 1078 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 PRAMEF19Q5SWL8 479 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 CTR9Q6PD62 1173 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 RNF180Q86T96 592 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 RIOX2Q8IUF8 465 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 ARPP21Q9UBL0 812 aaPredicted RBP15.94■□□□□ 0.14
HMGB3-204ENST00000448905 ADAMTS5Q9UNA0 930 aa15.94■□□□□ 0.14
HMGB3-204ENST00000448905 CTDP1Q9Y5B0 961 aaPredicted RBP15.94■□□□□ 0.14
HMGB3-204ENST00000448905 CYP2D7A0A087X1C5 515 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 VWA5AO00534 786 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 LRRFIP1Q32MZ4 808 aaKnown RBP15.93■□□□□ 0.14
HMGB3-204ENST00000448905 ANO1Q5XXA6 986 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 GIMAP6Q6P9H5 292 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 PRDM5Q9NQX1 630 aaPredicted RBP15.93■□□□□ 0.14
HMGB3-204ENST00000448905 ECHDC1Q9NTX5 307 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
HMGB3-204ENST00000448905 LRRC41Q15345 812 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 C1orf53Q5VUE5 145 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 ZNF444Q8N0Y2 327 aaPredicted RBP15.92■□□□□ 0.14
HMGB3-204ENST00000448905 FERMT2Q96AC1 680 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 DDX11Q96FC9 970 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 TINF2Q9BSI4 451 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 PUS7LQ9H0K6 701 aaKnown RBP15.92■□□□□ 0.14
HMGB3-204ENST00000448905 XPNPEP3Q9NQH7 507 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 TACC3Q9Y6A5 838 aa15.92■□□□□ 0.14
HMGB3-204ENST00000448905 GNAT2P19087 354 aa15.91■□□□□ 0.14
HMGB3-204ENST00000448905 SBK1Q52WX2 424 aa15.91■□□□□ 0.14
HMGB3-204ENST00000448905 CLEC10AQ8IUN9 316 aa15.91■□□□□ 0.14
HMGB3-204ENST00000448905 PRPF38AQ8NAV1 312 aaKnown RBP15.91■□□□□ 0.14
HMGB3-204ENST00000448905 STRBPQ96SI9 672 aaKnown RBP15.91■□□□□ 0.14
HMGB3-204ENST00000448905 LAMA3Q16787 3333 aa15.91■□□□□ 0.14
HMGB3-204ENST00000448905 FOCADQ5VW36 1801 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 MINDY4BA8MYZ0 360 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 ZBED4O75132 1171 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 APPP05067 770 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 PGK2P07205 417 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 ZFYP08048 801 aaPredicted RBP15.9■□□□□ 0.14
HMGB3-204ENST00000448905 ZNF792Q3KQV3 632 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 FAM83BQ5T0W9 1011 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 MSL3Q8N5Y2 521 aaKnown RBP15.9■□□□□ 0.14
HMGB3-204ENST00000448905 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 FBXO28Q9NVF7 368 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 NYAP2Q9P242 653 aa15.9■□□□□ 0.14
HMGB3-204ENST00000448905 F5H6K3 240 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 AKR1A1P14550 325 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 KLRC3Q07444 240 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 TRIM60Q495X7 471 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 FAM47AQ5JRC9 791 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 ZNF697Q5TEC3 545 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 NUP133Q8WUM0 1156 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 BADQ92934 168 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 SLF1Q9BQI6 1058 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 FAM184BQ9ULE4 1060 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 MYH1P12882 1939 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 MAST2Q6P0Q8 1798 aa15.89■□□□□ 0.13
HMGB3-204ENST00000448905 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
HMGB3-204ENST00000448905 SLC4A3P48751 1232 aa15.88■□□□□ 0.13
HMGB3-204ENST00000448905 TLE2Q04725 743 aa15.88■□□□□ 0.13
HMGB3-204ENST00000448905 SNX17Q15036 470 aa15.88■□□□□ 0.13
HMGB3-204ENST00000448905 SHHQ15465 462 aa15.88■□□□□ 0.13
HMGB3-204ENST00000448905 KBTBD3Q8NAB2 608 aa15.88■□□□□ 0.13
HMGB3-204ENST00000448905 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
HMGB3-204ENST00000448905 NACAP1Q9BZK3 213 aa15.88■□□□□ 0.13
HMGB3-204ENST00000448905 ZNF214Q9UL59 606 aaPredicted RBP15.88■□□□□ 0.13
HMGB3-204ENST00000448905 GSG1L2A8MUP6 293 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 DCDC2CA8MYV0 355 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 SMARCA5O60264 1052 aaPredicted RBP15.87■□□□□ 0.13
HMGB3-204ENST00000448905 PGK1P00558 417 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
HMGB3-204ENST00000448905 TDO2P48775 406 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 SNRNP48Q6IEG0 339 aaKnown RBP15.87■□□□□ 0.13
HMGB3-204ENST00000448905 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 APPBP2Q92624 585 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 FAM161BQ96MY7 647 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 SPC25Q9HBM1 224 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 FBXO40Q9UH90 709 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
HMGB3-204ENST00000448905 PATL2C9JE40 543 aaKnown RBP15.86■□□□□ 0.13
HMGB3-204ENST00000448905 CHGBP05060 677 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 CLTBP09497 229 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 FDX1P10109 184 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 RAG1P15918 1043 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 RASA1P20936 1047 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 CPXCR1Q8N123 301 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 ANKRD35Q8N283 1001 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.86■□□□□ 0.13
HMGB3-204ENST00000448905 DCTPP1Q9H773 170 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 PDLIM7Q9NR12 457 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 TMEM39AQ9NV64 488 aa15.86■□□□□ 0.13
HMGB3-204ENST00000448905 FEM1BQ9UK73 627 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms