RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 MB21D1Q8N884 522 aa15.11■□□□□ 0.01
PRPF40A-203ENST00000448428 MOV10L1Q9BXT6 1211 aaKnown RBP15.11■□□□□ 0.01
PRPF40A-203ENST00000448428 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
PRPF40A-203ENST00000448428 ZNFX1Q9P2E3 1918 aaKnown RBP15.11■□□□□ 0.01
PRPF40A-203ENST00000448428 TSPY2A6NKD2 308 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 NMT2O60551 498 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 XRCC5P13010 732 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 PTPREP23469 700 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 WDR78Q5VTH9 848 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 LRRC47Q8N1G4 583 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 SOCS4Q8WXH5 440 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 SPATC1LQ9H0A9 340 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 RNF208Q9H0X6 261 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 UNC93B1Q9H1C4 597 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 IL25Q9H293 177 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 SYNPO2Q9UMS6 1093 aa15.1■□□□□ 0.01
PRPF40A-203ENST00000448428 SLC15A5A6NIM6 579 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 VWA5AO00534 786 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 GJB1P08034 283 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 TRIM32Q13049 653 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 PLS1Q14651 629 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 TMEM132BQ14DG7 1078 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 RRP12Q5JTH9 1297 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 GMCL1P1Q8NEA9 526 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 TOMM22Q9NS69 142 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 PPP1R9AQ9ULJ8 1098 aa15.09■□□□□ 0.01
PRPF40A-203ENST00000448428 ZNF213O14771 459 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 HMGCRP04035 888 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 ERCC3P19447 782 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 CHMLP26374 656 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 RGS2P41220 211 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 MAP2K5Q13163 448 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 CCL14Q16627 93 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 AKNAD1Q5T1N1 836 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 SLFN13Q68D06 897 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 MFSD6Q6ZSS7 791 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 TBC1D10CQ8IV04 446 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 SHCBP1Q8NEM2 672 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 TRIB2Q92519 343 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 SLF1Q9BQI6 1058 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 DSCC1Q9BVC3 393 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 STX8Q9UNK0 236 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 IVNS1ABPQ9Y6Y0 642 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 LAMA4Q16363 1823 aa15.08■□□□□ 0
PRPF40A-203ENST00000448428 GJA8P48165 433 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 NOVP48745 357 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 PPP4R3BQ5MIZ7 849 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 CENPQQ7L2Z9 268 aaPredicted RBP15.07■□□□□ 0
PRPF40A-203ENST00000448428 NCAPG2Q86XI2 1143 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 PRPF38AQ8NAV1 312 aaKnown RBP15.07■□□□□ 0
PRPF40A-203ENST00000448428 REPS2Q8NFH8 660 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 STAG1Q8WVM7 1258 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 SHISA4Q96DD7 197 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 MROH8Q9H579 483 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
PRPF40A-203ENST00000448428 STRNO43815 780 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 SGPL1O95470 568 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 PCP11498 1178 aaKnown RBP15.06■□□□□ 0
PRPF40A-203ENST00000448428 BMP3P12645 472 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 STAT3P40763 770 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 GRB14Q14449 540 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 SKAP1Q86WV1 359 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 RIOX2Q8IUF8 465 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
PRPF40A-203ENST00000448428 U2AF1L4Q8WU68 220 aaKnown RBP15.06■□□□□ 0
PRPF40A-203ENST00000448428 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 APBA2Q99767 749 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 RNF41Q9H4P4 317 aaPredicted RBP15.06■□□□□ 0
PRPF40A-203ENST00000448428 FEM1BQ9UK73 627 aa15.06■□□□□ 0
PRPF40A-203ENST00000448428 SLC25A27O95847 323 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 HOXC6P09630 235 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ -0
PRPF40A-203ENST00000448428 MCCP23508 829 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 MAP3K21Q5TCX8 1036 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 NPLOC4Q8TAT6 608 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 KIFC2Q96AC6 838 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 GMCL1Q96IK5 515 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 DEFB118Q96PH6 123 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 HMX1Q9NP08 348 aaPredicted RBP15.05■□□□□ -0
PRPF40A-203ENST00000448428 PAK6Q9NQU5 681 aaPredicted RBP15.05■□□□□ -0
PRPF40A-203ENST00000448428 FLRT1Q9NZU1 646 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 CTNNA3Q9UI47 895 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 ZNF214Q9UL59 606 aaPredicted RBP15.05■□□□□ -0
PRPF40A-203ENST00000448428 RPTORQ8N122 1335 aa15.05■□□□□ -0
PRPF40A-203ENST00000448428 TNRC18O15417 2968 aaPredicted RBP15.04■□□□□ -0
PRPF40A-203ENST00000448428 NEDD4P46934 1319 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 TMEM232C9JQI7 657 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 COBLO75128 1261 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 ADORA2AP29274 412 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 SLC1A4P43007 532 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 CACNB2Q08289 660 aaPredicted RBP15.04■□□□□ -0
PRPF40A-203ENST00000448428 IMMTQ16891 758 aaKnown RBP15.04■□□□□ -0
PRPF40A-203ENST00000448428 RCSD1Q6JBY9 416 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 DPP9Q86TI2 863 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 TMEM47Q9BQJ4 181 aa15.04■□□□□ -0
PRPF40A-203ENST00000448428 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.04■□□□□ -0
PRPF40A-203ENST00000448428 ZNF236Q9UL36 1845 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms