RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 NID2Q14112 1375 aa11.22□□□□□ -0.61
LINC01949-201ENST00000445770 ZNF804AQ7Z570 1209 aa11.22□□□□□ -0.61
LINC01949-201ENST00000445770 ZNF444Q8N0Y2 327 aaPredicted RBP11.22□□□□□ -0.61
LINC01949-201ENST00000445770 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
LINC01949-201ENST00000445770 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
LINC01949-201ENST00000445770 SMTNL1A8MU46 457 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 FGRP09769 529 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 TERF1P54274 439 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 PFKFB3Q16875 520 aaPredicted RBP11.21□□□□□ -0.61
LINC01949-201ENST00000445770 PROM2Q8N271 834 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 LRRC15Q8TF66 581 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
LINC01949-201ENST00000445770 FLT1P17948 1338 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 FAM237AA0A1B0GTK4 181 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 SEMA3EO15041 775 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 DDAH1O94760 285 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 TOP1P11387 765 aaKnown RBP11.21□□□□□ -0.62
LINC01949-201ENST00000445770 TAL1P17542 331 aaPredicted RBP11.21□□□□□ -0.62
LINC01949-201ENST00000445770 MORC3Q14149 939 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 CCDC112Q8NEF3 446 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.62
LINC01949-201ENST00000445770 QTRT2Q9H974 415 aaKnown RBP11.21□□□□□ -0.62
LINC01949-201ENST00000445770 RBM28Q9NW13 759 aaKnown RBP11.21□□□□□ -0.62
LINC01949-201ENST00000445770 TRIM49BA6NDI0 452 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 CDK8P49336 464 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 CBX1P83916 185 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 HPS3Q969F9 1004 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 EYA3Q99504 573 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 BPIFA3Q9BQP9 254 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 IRX2Q9BZI1 471 aaPredicted RBP11.2□□□□□ -0.62
LINC01949-201ENST00000445770 OSBPL5Q9H0X9 879 aaPredicted RBP11.2□□□□□ -0.62
LINC01949-201ENST00000445770 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 USP17L5A8MUK1 530 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 KLRF2D3W0D1 207 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 IKBKBO14920 756 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 TOGARAM2Q6ZUX3 1019 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
LINC01949-201ENST00000445770 DDX4Q9NQI0 724 aaKnown RBP11.2□□□□□ -0.62
LINC01949-201ENST00000445770 IGSF3O75054 1194 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 SARSP49591 514 aaKnown RBP11.19□□□□□ -0.62
LINC01949-201ENST00000445770 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 VSTM4Q8IW00 320 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 BLIDQ8IZY5 108 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 CERS5Q8N5B7 392 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
LINC01949-201ENST00000445770 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 DBNDD1Q9H9R9 158 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 PRDM4Q9UKN5 801 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 CEP131Q9UPN4 1083 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 SLC16A2P36021 539 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 ST5P78524 1137 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 ATP2C1P98194 919 aaPredicted RBP11.19□□□□□ -0.62
LINC01949-201ENST00000445770 TCP10Q12799 353 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 ZFPM1Q8IX07 1006 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 COA7Q96BR5 231 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 PIGSQ96S52 555 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
LINC01949-201ENST00000445770 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
LINC01949-201ENST00000445770 SBF2Q86WG5 1849 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
LINC01949-201ENST00000445770 NKRFO15226 690 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC01949-201ENST00000445770 BAG3O95817 575 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 TFRCP02786 760 aaKnown RBP11.18□□□□□ -0.62
LINC01949-201ENST00000445770 CALM1P0DP23 149 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 CALM2P0DP24 149 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 CALM3P0DP25 149 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 NFIAQ12857 509 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
LINC01949-201ENST00000445770 DNAI1Q9UI46 699 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 SYNRGQ9UMZ2 1314 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 NAPAP54920 295 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 RHBDL3P58872 404 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 ELF2Q15723 593 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 LEMD3Q9Y2U8 911 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
LINC01949-201ENST00000445770 KIAA1551Q9HCM1 1747 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 CCDC194A0A1B0GVG4 234 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 SOWAHDA6NJG2 315 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 POLRMTO00411 1230 aaKnown RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 AKR1B1P15121 316 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 ZNF18P17022 549 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 KIF5BP33176 963 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 PMS1P54277 932 aaKnown RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 GSDMDP57764 484 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 SNAP25P60880 206 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 RRAGBQ5VZM2 374 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 DPP8Q6V1X1 898 aaPredicted RBP11.17□□□□□ -0.62
LINC01949-201ENST00000445770 VPS16Q9H269 839 aa11.17□□□□□ -0.62
LINC01949-201ENST00000445770 DAGLAQ9Y4D2 1042 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms