RNA–Protein interactions for RNA: ENST00000444490.6

ECM2-204, Transcript of extracellular matrix protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECM2, Length 2,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-204ENST00000444490 PHF20L1A8MW92 1017 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 MMP14P50281 582 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 TMEM179Q6ZVK1 233 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 MAD2L2Q9UI95 211 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 CFAP45Q9UL16 551 aa12.96□□□□□ -0.33
ECM2-204ENST00000444490 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.33
ECM2-204ENST00000444490 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.34
ECM2-204ENST00000444490 CDKL5O76039 1030 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 SLC16A2P36021 539 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 CAP2P40123 477 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
ECM2-204ENST00000444490 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 GRM4Q14833 912 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
ECM2-204ENST00000444490 TMTC3Q6ZXV5 915 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 PGBD1Q96JS3 809 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 WRNIP1Q96S55 665 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 ALG1Q9BT22 464 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
ECM2-204ENST00000444490 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
ECM2-204ENST00000444490 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
ECM2-204ENST00000444490 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
ECM2-204ENST00000444490 TRAF5O00463 557 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
ECM2-204ENST00000444490 CALM1P0DP23 149 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 CALM2P0DP24 149 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 CALM3P0DP25 149 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 PDHBP11177 359 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 IFNAR1P17181 557 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 SNAP25P60880 206 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 FUT2Q10981 343 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 HOMER1Q86YM7 354 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
ECM2-204ENST00000444490 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
ECM2-204ENST00000444490 KLRF2D3W0D1 207 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 TBC1D12O60347 775 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
ECM2-204ENST00000444490 GPKOWQ92917 476 aaPredicted RBP eCLIP12.93□□□□□ -0.34
ECM2-204ENST00000444490 MYH6P13533 1939 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 CNTNAP5Q8WYK1 1306 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 CYTH3O43739 400 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 CAMK4Q16566 473 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
ECM2-204ENST00000444490 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 DACT1Q9NYF0 836 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 ATAD5Q96QE3 1844 aa12.93□□□□□ -0.34
ECM2-204ENST00000444490 KIF28PB7ZC32 967 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
ECM2-204ENST00000444490 NOVP48745 357 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
ECM2-204ENST00000444490 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 VPS54Q9P1Q0 977 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 NID2Q14112 1375 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 IQCA1LA6NCM1 817 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 NDUFB10O96000 172 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
ECM2-204ENST00000444490 KIF5BP33176 963 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 AKAP17AQ02040 695 aaKnown RBP12.92□□□□□ -0.34
ECM2-204ENST00000444490 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 RBM28Q9NW13 759 aaKnown RBP12.92□□□□□ -0.34
ECM2-204ENST00000444490 NYAP2Q9P242 653 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 PALM3A6NDB9 673 aaPredicted RBP12.92□□□□□ -0.34
ECM2-204ENST00000444490 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 F5H6K3 240 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 MAP3K10Q02779 954 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 KLRC3Q07444 240 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 PKN1Q16512 942 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 KRT40Q6A162 431 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 FEZ1Q99689 392 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 RCOR1Q9UKL0 485 aa12.92□□□□□ -0.34
ECM2-204ENST00000444490 ZC3H4Q9UPT8 1303 aaKnown RBP12.91□□□□□ -0.34
ECM2-204ENST00000444490 ADAMTS3O15072 1205 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 SLC1A4P43007 532 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 KIF23Q02241 960 aaPredicted RBP12.91□□□□□ -0.34
ECM2-204ENST00000444490 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
ECM2-204ENST00000444490 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 NR1I2O75469 434 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 USP2O75604 605 aaPredicted RBP12.91□□□□□ -0.34
ECM2-204ENST00000444490 ME1P48163 572 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 GNL2Q13823 731 aaKnown RBP12.91□□□□□ -0.34
ECM2-204ENST00000444490 TRIM29Q14134 588 aa12.91□□□□□ -0.34
ECM2-204ENST00000444490 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms