RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 GPR142Q7Z601 462 aa25.86■■□□□ 1.73
TRAF4-205ENST00000444415 GMCL1P1Q8NEA9 526 aa25.86■■□□□ 1.73
TRAF4-205ENST00000444415 CCDC136Q96JN2 1154 aa25.86■■□□□ 1.73
TRAF4-205ENST00000444415 RAD21O60216 631 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 MTFR1Q15390 333 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 RRP12Q5JTH9 1297 aaKnown RBP25.85■■□□□ 1.73
TRAF4-205ENST00000444415 REPS2Q8NFH8 660 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 USP6NLQ92738 828 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 PPP1R9AQ9ULJ8 1098 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 ZNF213O14771 459 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 ADCY3O60266 1144 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 MAPK4P31152 587 aa25.85■■□□□ 1.73
TRAF4-205ENST00000444415 MOV10L1Q9BXT6 1211 aaKnown RBP25.85■■□□□ 1.73
TRAF4-205ENST00000444415 MYCP01106 439 aaPredicted RBP25.84■■□□□ 1.73
TRAF4-205ENST00000444415 TMEM132BQ14DG7 1078 aa25.84■■□□□ 1.73
TRAF4-205ENST00000444415 MORN1Q5T089 497 aa25.84■■□□□ 1.73
TRAF4-205ENST00000444415 SLAIN1Q8ND83 568 aa25.84■■□□□ 1.73
TRAF4-205ENST00000444415 SPATC1LQ9H0A9 340 aa25.84■■□□□ 1.73
TRAF4-205ENST00000444415 TOMM22Q9NS69 142 aa25.84■■□□□ 1.73
TRAF4-205ENST00000444415 STX8Q9UNK0 236 aa25.84■■□□□ 1.73
TRAF4-205ENST00000444415 ZNF236Q9UL36 1845 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 PCP11498 1178 aaKnown RBP25.83■■□□□ 1.73
TRAF4-205ENST00000444415 BMP2KLQ5H9B9 411 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 RCSD1Q6JBY9 416 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 SAMD1Q6SPF0 538 aaPredicted RBP25.83■■□□□ 1.73
TRAF4-205ENST00000444415 MFSD6Q6ZSS7 791 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 NBPF11Q86T75 865 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 PXYLP1Q8TE99 480 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 TCP11L1Q9NUJ3 509 aa25.83■■□□□ 1.73
TRAF4-205ENST00000444415 SLFN13Q68D06 897 aa25.82■■□□□ 1.72
TRAF4-205ENST00000444415 PLEKHH3Q7Z736 793 aa25.82■■□□□ 1.72
TRAF4-205ENST00000444415 MB21D1Q8N884 522 aa25.82■■□□□ 1.72
TRAF4-205ENST00000444415 TAF6LQ9Y6J9 622 aa25.82■■□□□ 1.72
TRAF4-205ENST00000444415 VWA5AO00534 786 aa25.81■■□□□ 1.72
TRAF4-205ENST00000444415 RUFY2Q8WXA3 655 aa25.81■■□□□ 1.72
TRAF4-205ENST00000444415 ZNF214Q9UL59 606 aaPredicted RBP25.81■■□□□ 1.72
TRAF4-205ENST00000444415 ZNFX1Q9P2E3 1918 aaKnown RBP25.81■■□□□ 1.72
TRAF4-205ENST00000444415 CCNA1P78396 465 aa25.8■■□□□ 1.72
TRAF4-205ENST00000444415 TRIB2Q92519 343 aa25.8■■□□□ 1.72
TRAF4-205ENST00000444415 CHMP4CQ96CF2 233 aa25.8■■□□□ 1.72
TRAF4-205ENST00000444415 SLF1Q9BQI6 1058 aa25.8■■□□□ 1.72
TRAF4-205ENST00000444415 RNF41Q9H4P4 317 aaPredicted RBP25.8■■□□□ 1.72
TRAF4-205ENST00000444415 INHAP05111 366 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 NEFLP07196 543 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 CYP2B6P20813 491 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 TRIM32Q13049 653 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 IMMTQ16891 758 aaKnown RBP25.79■■□□□ 1.72
TRAF4-205ENST00000444415 SOCS4Q8WXH5 440 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 GMCL1Q96IK5 515 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 NUDT12Q9BQG2 462 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 TMEM47Q9BQJ4 181 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 CYP21A2P08686 494 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 ERCC3P19447 782 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 PTPREP23469 700 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 GRB14Q14449 540 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 CTNNA3Q9UI47 895 aa25.79■■□□□ 1.72
TRAF4-205ENST00000444415 B4E1Z4 1266 aa25.78■■□□□ 1.72
TRAF4-205ENST00000444415 BMP3P12645 472 aa25.78■■□□□ 1.72
TRAF4-205ENST00000444415 MCCP23508 829 aa25.78■■□□□ 1.72
TRAF4-205ENST00000444415 SHCBP1Q8NEM2 672 aa25.78■■□□□ 1.72
TRAF4-205ENST00000444415 ZKSCAN3Q9BRR0 538 aa25.78■■□□□ 1.72
TRAF4-205ENST00000444415 SMCHD1A6NHR9 2005 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 KDM4AO75164 1064 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 EN2P19622 333 aaPredicted RBP25.77■■□□□ 1.72
TRAF4-205ENST00000444415 PLS1Q14651 629 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 CCL14Q16627 93 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 PPP4R3BQ5MIZ7 849 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 ESR2Q92731 530 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 MAP4K1Q92918 833 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 ESYT1Q9BSJ8 1104 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 UNC93B1Q9H1C4 597 aa25.77■■□□□ 1.72
TRAF4-205ENST00000444415 XRCC5P13010 732 aaKnown RBP25.76■■□□□ 1.71
TRAF4-205ENST00000444415 CCL5P13501 91 aa25.76■■□□□ 1.71
TRAF4-205ENST00000444415 MAP2K5Q13163 448 aa25.76■■□□□ 1.71
TRAF4-205ENST00000444415 WDR78Q5VTH9 848 aa25.76■■□□□ 1.71
TRAF4-205ENST00000444415 PRPF38AQ8NAV1 312 aaKnown RBP25.76■■□□□ 1.71
TRAF4-205ENST00000444415 SHISA4Q96DD7 197 aa25.76■■□□□ 1.71
TRAF4-205ENST00000444415 LSG1Q9H089 658 aaKnown RBP25.76■■□□□ 1.71
TRAF4-205ENST00000444415 FEM1BQ9UK73 627 aa25.76■■□□□ 1.71
TRAF4-205ENST00000444415 SLC15A5A6NIM6 579 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 CENPBP07199 599 aaPredicted RBP25.75■■□□□ 1.71
TRAF4-205ENST00000444415 TOP1P11387 765 aaKnown RBP25.75■■□□□ 1.71
TRAF4-205ENST00000444415 SLC1A4P43007 532 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 KCTD1Q719H9 257 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 RIOX2Q8IUF8 465 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 CCAR1Q8IX12 1150 aaKnown RBP25.75■■□□□ 1.71
TRAF4-205ENST00000444415 KIFC2Q96AC6 838 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 FLRT1Q9NZU1 646 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 ZSWIM5Q9P217 1185 aa25.75■■□□□ 1.71
TRAF4-205ENST00000444415 PDE4DIPQ5VU43 2346 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 TMEM232C9JQI7 657 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 IGHA2P01877 340 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 HMGCRP04035 888 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 STOX1Q6ZVD7 989 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 NPLOC4Q8TAT6 608 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 APBA2Q99767 749 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 SLC38A10Q9HBR0 1119 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 BIN2Q9UBW5 565 aaPredicted RBP25.74■■□□□ 1.71
TRAF4-205ENST00000444415 RIPK3Q9Y572 518 aa25.74■■□□□ 1.71
TRAF4-205ENST00000444415 PLXNA1Q9UIW2 1896 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms