RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 COL11A1P12107 1806 aaPredicted RBP23.82■■□□□ 1.4
EDEM1-203ENST00000443790 COL6A3P12111 3177 aa23.82■■□□□ 1.4
EDEM1-203ENST00000443790 SEPT4O43236 478 aa23.82■■□□□ 1.4
EDEM1-203ENST00000443790 SLC25A27O95847 323 aa23.82■■□□□ 1.4
EDEM1-203ENST00000443790 FCER1AP12319 257 aa23.82■■□□□ 1.4
EDEM1-203ENST00000443790 ATN1P54259 1190 aaPredicted RBP23.82■■□□□ 1.4
EDEM1-203ENST00000443790 KBTBD3Q8NAB2 608 aa23.82■■□□□ 1.4
EDEM1-203ENST00000443790 MAML3Q96JK9 1138 aa23.82■■□□□ 1.4
EDEM1-203ENST00000443790 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.82■■□□□ 1.4
EDEM1-203ENST00000443790 RRP1P56182 461 aaKnown RBP23.81■■□□□ 1.4
EDEM1-203ENST00000443790 MDM2Q00987 491 aaPredicted RBP23.81■■□□□ 1.4
EDEM1-203ENST00000443790 SBK1Q52WX2 424 aa23.81■■□□□ 1.4
EDEM1-203ENST00000443790 GJC2Q5T442 439 aaPredicted RBP23.81■■□□□ 1.4
EDEM1-203ENST00000443790 ARRDC4Q8NCT1 418 aa23.81■■□□□ 1.4
EDEM1-203ENST00000443790 GPATCH3Q96I76 525 aa23.81■■□□□ 1.4
EDEM1-203ENST00000443790 DCTPP1Q9H773 170 aa23.81■■□□□ 1.4
EDEM1-203ENST00000443790 PPP1R9AQ9ULJ8 1098 aa23.81■■□□□ 1.4
EDEM1-203ENST00000443790 ROBO3Q96MS0 1386 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 GSG1L2A8MUP6 293 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 FAM83BQ5T0W9 1011 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 ANO1Q5XXA6 986 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 GIMAP6Q6P9H5 292 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 RIOX2Q8IUF8 465 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 APPBP2Q92624 585 aa23.8■■□□□ 1.4
EDEM1-203ENST00000443790 KBTBD13C9JR72 458 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 VWA5AO00534 786 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 RAD21O60216 631 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 RASA1P20936 1047 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 RTP1P59025 263 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 PRAMEF19Q5SWL8 479 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 TSHZ3Q63HK5 1081 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 OSBP2Q969R2 916 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 MMP19Q99542 508 aa23.79■■□□□ 1.4
EDEM1-203ENST00000443790 ZNF214Q9UL59 606 aaPredicted RBP23.79■■□□□ 1.4
EDEM1-203ENST00000443790 RNF113AO15541 343 aaKnown RBP23.77■■□□□ 1.4
EDEM1-203ENST00000443790 STAT3P40763 770 aa23.77■■□□□ 1.4
EDEM1-203ENST00000443790 STK11IPQ8N1F8 1099 aa23.77■■□□□ 1.4
EDEM1-203ENST00000443790 DEFB123Q8N688 67 aa23.77■■□□□ 1.4
EDEM1-203ENST00000443790 REPS2Q8NFH8 660 aa23.77■■□□□ 1.4
EDEM1-203ENST00000443790 MKNK2Q9HBH9 465 aa23.77■■□□□ 1.4
EDEM1-203ENST00000443790 EPB41L4AQ9HCS5 686 aaPredicted RBP23.77■■□□□ 1.4
EDEM1-203ENST00000443790 ZNFX1Q9P2E3 1918 aaKnown RBP23.76■■□□□ 1.39
EDEM1-203ENST00000443790 MINDY4BA8MYZ0 360 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 GPAA1O43292 621 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 PGK2P07205 417 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 ZFYP08048 801 aaPredicted RBP23.76■■□□□ 1.39
EDEM1-203ENST00000443790 COPB2P35606 906 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 KCTD2Q14681 263 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 FAM47AQ5JRC9 791 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 LBHD1Q9BQE6 289 aaPredicted RBP23.76■■□□□ 1.39
EDEM1-203ENST00000443790 NYAP2Q9P242 653 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 NRBP1Q9UHY1 535 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 ATP11BQ9Y2G3 1177 aa23.76■■□□□ 1.39
EDEM1-203ENST00000443790 LTBP2Q14767 1821 aa23.75■■□□□ 1.39
EDEM1-203ENST00000443790 MYCNP04198 464 aaPredicted RBP23.75■■□□□ 1.39
EDEM1-203ENST00000443790 SLC39A5Q6ZMH5 540 aa23.75■■□□□ 1.39
EDEM1-203ENST00000443790 Q7L0L9 218 aa23.75■■□□□ 1.39
EDEM1-203ENST00000443790 NUP88Q99567 741 aaPredicted RBP23.75■■□□□ 1.39
EDEM1-203ENST00000443790 SLF1Q9BQI6 1058 aa23.75■■□□□ 1.39
EDEM1-203ENST00000443790 PRKAG2Q9UGJ0 569 aa23.75■■□□□ 1.39
EDEM1-203ENST00000443790 DIS3Q9Y2L1 958 aaKnown RBP23.75■■□□□ 1.39
EDEM1-203ENST00000443790 PLXNA1Q9UIW2 1896 aa23.75■■□□□ 1.39
EDEM1-203ENST00000443790 M0R2C6 588 aa23.74■■□□□ 1.39
EDEM1-203ENST00000443790 GNAT2P19087 354 aa23.74■■□□□ 1.39
EDEM1-203ENST00000443790 SNX17Q15036 470 aa23.74■■□□□ 1.39
EDEM1-203ENST00000443790 LRRC41Q15345 812 aa23.74■■□□□ 1.39
EDEM1-203ENST00000443790 ZNF792Q3KQV3 632 aa23.74■■□□□ 1.39
EDEM1-203ENST00000443790 TINF2Q9BSI4 451 aa23.74■■□□□ 1.39
EDEM1-203ENST00000443790 IGKV6D-41A0A0C4DH26 115 aa23.73■■□□□ 1.39
EDEM1-203ENST00000443790 F5H6K3 240 aa23.73■■□□□ 1.39
EDEM1-203ENST00000443790 NDUFB10O96000 172 aa23.73■■□□□ 1.39
EDEM1-203ENST00000443790 TDO2P48775 406 aa23.73■■□□□ 1.39
EDEM1-203ENST00000443790 KLRC3Q07444 240 aa23.73■■□□□ 1.39
EDEM1-203ENST00000443790 TEX13BQ9BXU2 312 aa23.73■■□□□ 1.39
EDEM1-203ENST00000443790 LAMA2P24043 3122 aaKnown RBP23.72■■□□□ 1.39
EDEM1-203ENST00000443790 ADCYAP1R1P41586 468 aa23.72■■□□□ 1.39
EDEM1-203ENST00000443790 SLC17A8Q8NDX2 589 aa23.72■■□□□ 1.39
EDEM1-203ENST00000443790 ZNF287Q9HBT7 754 aa23.72■■□□□ 1.39
EDEM1-203ENST00000443790 TTC41PQ6P2S7 1318 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 RARBP10826 455 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 LRRFIP1Q32MZ4 808 aaKnown RBP23.71■■□□□ 1.39
EDEM1-203ENST00000443790 TRIM60Q495X7 471 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 SNRNP48Q6IEG0 339 aaKnown RBP23.71■■□□□ 1.39
EDEM1-203ENST00000443790 XPNPEP3Q9NQH7 507 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 MTMR10Q9NXD2 777 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 CLIP2Q9UDT6 1046 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 MYH4Q9Y623 1939 aa23.71■■□□□ 1.39
EDEM1-203ENST00000443790 PRDM1O75626 825 aa23.7■■□□□ 1.38
EDEM1-203ENST00000443790 APPP05067 770 aa23.7■■□□□ 1.38
EDEM1-203ENST00000443790 TAL1P17542 331 aaPredicted RBP23.7■■□□□ 1.38
EDEM1-203ENST00000443790 C1orf53Q5VUE5 145 aa23.7■■□□□ 1.38
EDEM1-203ENST00000443790 ZNF444Q8N0Y2 327 aaPredicted RBP23.7■■□□□ 1.38
EDEM1-203ENST00000443790 PRPF38AQ8NAV1 312 aaKnown RBP23.7■■□□□ 1.38
EDEM1-203ENST00000443790 FERMT2Q96AC1 680 aa23.7■■□□□ 1.38
EDEM1-203ENST00000443790 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
EDEM1-203ENST00000443790 PRDM5Q9NQX1 630 aaPredicted RBP23.7■■□□□ 1.38
EDEM1-203ENST00000443790 PHF24Q9UPV7 400 aa23.7■■□□□ 1.38
EDEM1-203ENST00000443790 PATL2C9JE40 543 aaKnown RBP23.69■■□□□ 1.38
EDEM1-203ENST00000443790 ZNF865P0CJ78 1059 aaPredicted RBP23.69■■□□□ 1.38
EDEM1-203ENST00000443790 IFNL3Q8IZI9 196 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms