RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 MAPK4P31152 587 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 TMEM132BQ14DG7 1078 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 CCL14Q16627 93 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 PLEKHH3Q7Z736 793 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 GOPCQ9HD26 462 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 DIAPH3Q9NSV4 1193 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 HOXC10Q9NYD6 342 aa13.29□□□□□ -0.28
PRKD3-203ENST00000443187 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
PRKD3-203ENST00000443187 COL11A1P12107 1806 aaPredicted RBP13.29□□□□□ -0.28
PRKD3-203ENST00000443187 TTLL1O95922 423 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 SLC3A2P08195 630 aaKnown RBP13.28□□□□□ -0.28
PRKD3-203ENST00000443187 NOVP48745 357 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 TMEM106CQ9BVX2 250 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 SPATC1LQ9H0A9 340 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 FLRT1Q9NZU1 646 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 PPP1R9AQ9ULJ8 1098 aa13.28□□□□□ -0.28
PRKD3-203ENST00000443187 TSPY2A6NKD2 308 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 VWA5AO00534 786 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 RANBP6O60518 1105 aaKnown RBP13.27□□□□□ -0.29
PRKD3-203ENST00000443187 ERCC3P19447 782 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 PTPREP23469 700 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 CHMLP26374 656 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 WDR78Q5VTH9 848 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 RNF208Q9H0X6 261 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
PRKD3-203ENST00000443187 NEDD4P46934 1319 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 LAMA4Q16363 1823 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.29
PRKD3-203ENST00000443187 IGHA2P01877 340 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 HMGCRP04035 888 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 GJB1P08034 283 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 UBXN2AP68543 259 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 CCNA1P78396 465 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 GRB14Q14449 540 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 PLS1Q14651 629 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
PRKD3-203ENST00000443187 AKNAD1Q5T1N1 836 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 MB21D1Q8N884 522 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 NPLOC4Q8TAT6 608 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 STAG1Q8WVM7 1258 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 SOCS4Q8WXH5 440 aa13.26□□□□□ -0.29
PRKD3-203ENST00000443187 PAK6Q9NQU5 681 aaPredicted RBP13.26□□□□□ -0.29
PRKD3-203ENST00000443187 SLC15A5A6NIM6 579 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 HIP1O00291 1037 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 COBLO75128 1261 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 XRCC5P13010 732 aaKnown RBP13.25□□□□□ -0.29
PRKD3-203ENST00000443187 GJA8P48165 433 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 PTH1RQ03431 593 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 MAP3K21Q5TCX8 1036 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 CCAR1Q8IX12 1150 aaKnown RBP13.25□□□□□ -0.29
PRKD3-203ENST00000443187 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
PRKD3-203ENST00000443187 SLF1Q9BQI6 1058 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 DSCC1Q9BVC3 393 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 SYNPO2Q9UMS6 1093 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 STX8Q9UNK0 236 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 RIPK3Q9Y572 518 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 ZNF236Q9UL36 1845 aa13.25□□□□□ -0.29
PRKD3-203ENST00000443187 HOXC6P09630 235 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 MCCP23508 829 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 ADORA2AP29274 412 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 RGS2P41220 211 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
PRKD3-203ENST00000443187 CACNB2Q08289 660 aaPredicted RBP13.24□□□□□ -0.29
PRKD3-203ENST00000443187 UBE2Q1Q7Z7E8 422 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 DEFB118Q96PH6 123 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 APBA2Q99767 749 aa13.24□□□□□ -0.29
PRKD3-203ENST00000443187 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.291e-9■■■■■ 54.1
PRKD3-203ENST00000443187 TMEM232C9JQI7 657 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 ZNF213O14771 459 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 SGPL1O95470 568 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 BMP3P12645 472 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
PRKD3-203ENST00000443187 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
PRKD3-203ENST00000443187 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
PRKD3-203ENST00000443187 STAT3P40763 770 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 KCTD1Q719H9 257 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 CENPQQ7L2Z9 268 aaPredicted RBP13.23□□□□□ -0.29
PRKD3-203ENST00000443187 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 RIOX2Q8IUF8 465 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 ZKSCAN3Q9BRR0 538 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
PRKD3-203ENST00000443187 TCP11L1Q9NUJ3 509 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
PRKD3-203ENST00000443187 RPTORQ8N122 1335 aa13.22□□□□□ -0.29
PRKD3-203ENST00000443187 RAD50Q92878 1312 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms