RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SSTR4P31391 388 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
PFDN4-202ENST00000441080 HRASLS5Q96KN8 279 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 KLHL25Q9H0H3 589 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 GBP3Q9H0R5 595 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 BSDC1Q9NW68 430 aaPredicted RBP7.5□□□□□ -1.21
PFDN4-202ENST00000441080 GFOD1Q9NXC2 390 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
PFDN4-202ENST00000441080 SHISA3A0PJX4 238 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 ANKRD34BA5PLL1 514 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 SIGLEC6O43699 453 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 SRFP11831 508 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 ITGA4P13612 1032 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 CD247P20963 164 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 CD97P48960 835 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
PFDN4-202ENST00000441080 PRKCQQ04759 706 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 NOL9Q5SY16 702 aaKnown RBP7.49□□□□□ -1.21
PFDN4-202ENST00000441080 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 THAP5Q7Z6K1 395 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 ADAT2Q7Z6V5 191 aaKnown RBP7.49□□□□□ -1.21
PFDN4-202ENST00000441080 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 FGD4Q96M96 766 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 DUSP15Q9H1R2 295 aaPredicted RBP7.49□□□□□ -1.21
PFDN4-202ENST00000441080 ZSWIM5Q9P217 1185 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 MSRB2Q9Y3D2 182 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 PITPNM2Q9BZ72 1349 aa7.49□□□□□ -1.21
PFDN4-202ENST00000441080 SUSD5O60279 629 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 MED26O95402 600 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 PRAMEF1O95521 474 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 AOC3Q16853 763 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 DPH6Q7L8W6 267 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 UBE2FQ969M7 185 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 SRPK1Q96SB4 655 aaKnown RBP7.48□□□□□ -1.21
PFDN4-202ENST00000441080 APBA2Q99767 749 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 CHST7Q9NS84 486 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 SEMA3GQ9NS98 782 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 PRR13Q9NZ81 148 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 WHRNQ9P202 907 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 SUSD2Q9UGT4 822 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
PFDN4-202ENST00000441080 KIAA1324LA8MWY0 1029 aaPredicted RBP7.47□□□□□ -1.21
PFDN4-202ENST00000441080 PPM1BO75688 479 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 TPP2P29144 1249 aaPredicted RBP7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ZNF445P59923 1031 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 BMS1Q14692 1282 aaKnown RBP7.47□□□□□ -1.21
PFDN4-202ENST00000441080 CCDC144BQ3MJ40 725 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 TSPYL5Q86VY4 417 aaPredicted RBP7.47□□□□□ -1.21
PFDN4-202ENST00000441080 DTX1Q86Y01 620 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 STK11IPQ8N1F8 1099 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ADCY4Q8NFM4 1077 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ENOX1Q8TC92 643 aaKnown RBP7.47□□□□□ -1.21
PFDN4-202ENST00000441080 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 BRF1Q92994 677 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 MKL1Q969V6 931 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 DEPDC7Q96QD5 511 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 DSCC1Q9BVC3 393 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 HDAC8Q9BY41 377 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ZSWIM4Q9H7M6 989 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 ATP13A1Q9HD20 1204 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 SNTG2Q9NY99 539 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 SUGT1Q9Y2Z0 365 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 FHOD1Q9Y613 1164 aa7.47□□□□□ -1.21
PFDN4-202ENST00000441080 MEIS1O00470 390 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 PDPK1O15530 556 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 PRNPP04156 253 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 SPINK2P20155 84 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 RASA3Q14644 834 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 VSIG10LQ86VR7 867 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 FIBCD1Q8N539 461 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 ZNF655Q8N720 491 aaPredicted RBP7.46□□□□□ -1.22
PFDN4-202ENST00000441080 DAGLBQ8NCG7 672 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
PFDN4-202ENST00000441080 PPP1R14AQ96A00 147 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 MINPP1Q9UNW1 487 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 SLC5A6Q9Y289 635 aa7.46□□□□□ -1.22
PFDN4-202ENST00000441080 WASH4PA8MWX3 477 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 BNIP3Q12983 259 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 IKZF1Q13422 519 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 SV2CQ496J9 727 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 TMPRSS7Q7RTY8 843 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 LRP10Q7Z4F1 713 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 ST13P5Q8NFI4 369 aaPredicted RBP7.45□□□□□ -1.22
PFDN4-202ENST00000441080 EPN3Q9H201 632 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 NOL6Q9H6R4 1146 aaKnown RBP7.45□□□□□ -1.22
PFDN4-202ENST00000441080 PCMTD2Q9NV79 361 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 APEX2Q9UBZ4 518 aa7.45□□□□□ -1.22
PFDN4-202ENST00000441080 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
PFDN4-202ENST00000441080 CDK11AQ9UQ88 783 aaPredicted RBP7.45□□□□□ -1.22
PFDN4-202ENST00000441080 A0A087WZG4 1122 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 LTKP29376 864 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 CD96P40200 585 aa7.44□□□□□ -1.22
PFDN4-202ENST00000441080 PPP2R5DQ14738 602 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms