RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 C11orf49Q9H6J7 331 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 FBXO28Q9NVF7 368 aa20.09■□□□□ 0.81
COL16A1-204ENST00000440437 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
COL16A1-204ENST00000440437 FAM83BQ5T0W9 1011 aa20.08■□□□□ 0.81
COL16A1-204ENST00000440437 ANKRD45Q5TZF3 282 aa20.08■□□□□ 0.81
COL16A1-204ENST00000440437 MROH8Q9H579 483 aa20.08■□□□□ 0.81
COL16A1-204ENST00000440437 RBM27Q9P2N5 1060 aaKnown RBP20.08■□□□□ 0.81
COL16A1-204ENST00000440437 PPP1R9AQ9ULJ8 1098 aa20.08■□□□□ 0.81
COL16A1-204ENST00000440437 TRIOBPQ9H2D6 2365 aa20.08■□□□□ 0.8
COL16A1-204ENST00000440437 FOXP2O15409 715 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 APPP05067 770 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 COL6A1P12109 1028 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 CYBAP13498 195 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 CYP2C19P33261 490 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 PLS1Q14651 629 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 OLFML2BQ68BL8 750 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 NCAPG2Q86XI2 1143 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 ABRAQ8N0Z2 381 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 REPS2Q8NFH8 660 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
COL16A1-204ENST00000440437 STAP2Q9UGK3 403 aa20.07■□□□□ 0.8
COL16A1-204ENST00000440437 RANBP2P49792 3224 aaKnown RBP20.07■□□□□ 0.8
COL16A1-204ENST00000440437 VWA5AO00534 786 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 COBLO75128 1261 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 PRDM1O75626 825 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 SAMD1Q6SPF0 538 aaPredicted RBP20.06■□□□□ 0.8
COL16A1-204ENST00000440437 DPP9Q86TI2 863 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 TRPV1Q8NER1 839 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 ZNF287Q9HBT7 754 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 PCDH10Q9P2E7 1040 aa20.06■□□□□ 0.8
COL16A1-204ENST00000440437 ZNF214Q9UL59 606 aaPredicted RBP20.06■□□□□ 0.8
COL16A1-204ENST00000440437 SLC25A27O95847 323 aa20.05■□□□□ 0.8
COL16A1-204ENST00000440437 PDE1AP54750 535 aa20.05■□□□□ 0.8
COL16A1-204ENST00000440437 RIOX2Q8IUF8 465 aa20.05■□□□□ 0.8
COL16A1-204ENST00000440437 NUP88Q99567 741 aaPredicted RBP20.05■□□□□ 0.8
COL16A1-204ENST00000440437 NACAP1Q9BZK3 213 aa20.05■□□□□ 0.8
COL16A1-204ENST00000440437 NAPBQ9H115 298 aa20.05■□□□□ 0.8
COL16A1-204ENST00000440437 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
COL16A1-204ENST00000440437 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
COL16A1-204ENST00000440437 F5H6K3 240 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 RAD21O60216 631 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 MSCO60682 206 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 NDUFB10O96000 172 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 KLRC3Q07444 240 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 PPARAQ07869 468 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 CCDC129Q6ZRS4 1044 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 C7orf61Q8IZ16 206 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 ZNF444Q8N0Y2 327 aaPredicted RBP20.04■□□□□ 0.8
COL16A1-204ENST00000440437 MKL1Q969V6 931 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 CEP95Q96GE4 821 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 MTMR4Q9NYA4 1195 aa20.04■□□□□ 0.8
COL16A1-204ENST00000440437 FCER1AP12319 257 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 AAMPQ13685 434 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 EVI5LQ96CN4 794 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 MAML3Q96JK9 1138 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 SLF1Q9BQI6 1058 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 CLIP2Q9UDT6 1046 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 SYNPO2Q9UMS6 1093 aa20.03■□□□□ 0.8
COL16A1-204ENST00000440437 CNGA1P29973 690 aa20.02■□□□□ 0.8
COL16A1-204ENST00000440437 STAT3P40763 770 aa20.02■□□□□ 0.8
COL16A1-204ENST00000440437 PDE4BQ07343 736 aa20.02■□□□□ 0.8
COL16A1-204ENST00000440437 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.8
COL16A1-204ENST00000440437 SLC5A4Q9NY91 659 aa20.02■□□□□ 0.8
COL16A1-204ENST00000440437 TTLL1O95922 423 aa20.01■□□□□ 0.79
COL16A1-204ENST00000440437 COPB2P35606 906 aa20.01■□□□□ 0.79
COL16A1-204ENST00000440437 SMC5Q8IY18 1101 aa20.01■□□□□ 0.79
COL16A1-204ENST00000440437 MMP19Q99542 508 aa20.01■□□□□ 0.79
COL16A1-204ENST00000440437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL16A1-204ENST00000440437 SMCHD1A6NHR9 2005 aa20.01■□□□□ 0.79
COL16A1-204ENST00000440437 SLC3A2P08195 630 aaKnown RBP20■□□□□ 0.79
COL16A1-204ENST00000440437 TSPY3P0CV98 308 aa20■□□□□ 0.79
COL16A1-204ENST00000440437 TSPY8P0CW00 308 aa20■□□□□ 0.79
COL16A1-204ENST00000440437 VPS53Q5VIR6 699 aa20■□□□□ 0.79
COL16A1-204ENST00000440437 LRRC47Q8N1G4 583 aaKnown RBP20■□□□□ 0.79
COL16A1-204ENST00000440437 PRPF38AQ8NAV1 312 aaKnown RBP20■□□□□ 0.79
COL16A1-204ENST00000440437 GMCL1P1Q8NEA9 526 aa20■□□□□ 0.79
COL16A1-204ENST00000440437 GDF15Q99988 308 aa20■□□□□ 0.79
COL16A1-204ENST00000440437 ZMYND8Q9ULU4 1186 aaPredicted RBP20■□□□□ 0.79
COL16A1-204ENST00000440437 DNAH12Q6ZR08 3092 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 A0A1W2PPC1 479 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 ATP2A1O14983 1001 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 SEPT4O43236 478 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 LRRC26Q2I0M4 334 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 ZNF792Q3KQV3 632 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 FAM47AQ5JRC9 791 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 TEX13BQ9BXU2 312 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 LNPKQ9C0E8 428 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 HELLSQ9NRZ9 838 aa19.99■□□□□ 0.79
COL16A1-204ENST00000440437 LTBP2Q14767 1821 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 DNM1LO00429 736 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 PGK2P07205 417 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 TFAP4Q01664 338 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 CTDSPL2Q05D32 466 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 KCTD2Q14681 263 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 TICAM2Q86XR7 235 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 ANAPC4Q9UJX5 808 aa19.98■□□□□ 0.79
COL16A1-204ENST00000440437 DIS3Q9Y2L1 958 aaKnown RBP19.98■□□□□ 0.79
COL16A1-204ENST00000440437 TACC3Q9Y6A5 838 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms