RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZMYM6O95789 1325 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 NMT2O60551 498 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 MORN1Q5T089 497 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 MB21D1Q8N884 522 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 TRIB2Q92519 343 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 KIAA0100Q14667 2235 aaKnown RBP16.28■□□□□ 0.2
LTBR-202ENST00000440421 CENPFP49454 3210 aa16.28■□□□□ 0.2
LTBR-202ENST00000440421 ORC4O43929 436 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 HMGCRP04035 888 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 PTPREP23469 700 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 RGS2P41220 211 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 TRIM32Q13049 653 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 USP6NLQ92738 828 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 MKL1Q969V6 931 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 ISY1Q9ULR0 285 aaKnown RBP16.27■□□□□ 0.2
LTBR-202ENST00000440421 STX8Q9UNK0 236 aa16.27■□□□□ 0.2
LTBR-202ENST00000440421 GJB1P08034 283 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 FGRP09769 529 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 ERCC3P19447 782 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 MAP2K5Q13163 448 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 CCL14Q16627 93 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 NCAPG2Q86XI2 1143 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 TBC1D10CQ8IV04 446 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 SLF1Q9BQI6 1058 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 IL25Q9H293 177 aa16.26■□□□□ 0.19
LTBR-202ENST00000440421 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
LTBR-202ENST00000440421 SLC15A5A6NIM6 579 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 VWA5AO00534 786 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 ZNF213O14771 459 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 XRCC5P13010 732 aaKnown RBP16.25■□□□□ 0.19
LTBR-202ENST00000440421 ZKSCAN1P17029 563 aaPredicted RBP16.25■□□□□ 0.19
LTBR-202ENST00000440421 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 MFSD6Q6ZSS7 791 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 DEFB118Q96PH6 123 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 APBA2Q99767 749 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 ADAMTS5Q9UNA0 930 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
LTBR-202ENST00000440421 GJA8P48165 433 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 GRB14Q14449 540 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 SKAP1Q86WV1 359 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 NKX2-3Q8TAU0 364 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 U2AF1L4Q8WU68 220 aaKnown RBP16.24■□□□□ 0.19
LTBR-202ENST00000440421 STAG1Q8WVM7 1258 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 KIFC2Q96AC6 838 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.24■□□□□ 0.19
LTBR-202ENST00000440421 MROH8Q9H579 483 aa16.24■□□□□ 0.19
LTBR-202ENST00000440421 NEDD4P46934 1319 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 BMP3P12645 472 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 MCCP23508 829 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 CHMLP26374 656 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 ADORA2AP29274 412 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 STAT3P40763 770 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 CENPQQ7L2Z9 268 aaPredicted RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 PRPF38AQ8NAV1 312 aaKnown RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 REPS2Q8NFH8 660 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 HMX1Q9NP08 348 aaPredicted RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 ZNF214Q9UL59 606 aaPredicted RBP16.23■□□□□ 0.19
LTBR-202ENST00000440421 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
LTBR-202ENST00000440421 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 STRNO43815 780 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 SGPL1O95470 568 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
LTBR-202ENST00000440421 PCP11498 1178 aaKnown RBP16.22■□□□□ 0.19
LTBR-202ENST00000440421 SLC1A4P43007 532 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
LTBR-202ENST00000440421 DPP9Q86TI2 863 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 RIOX2Q8IUF8 465 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 CPXCR1Q8N123 301 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 RUFY2Q8WXA3 655 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 PAK6Q9NQU5 681 aaPredicted RBP16.22■□□□□ 0.19
LTBR-202ENST00000440421 FLRT1Q9NZU1 646 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
LTBR-202ENST00000440421 CTDP1Q9Y5B0 961 aaPredicted RBP16.22■□□□□ 0.19
LTBR-202ENST00000440421 TNRC18O15417 2968 aaPredicted RBP16.22■□□□□ 0.19
LTBR-202ENST00000440421 RAD50Q92878 1312 aa16.21■□□□□ 0.19
LTBR-202ENST00000440421 ZBED4O75132 1171 aa16.21■□□□□ 0.19
LTBR-202ENST00000440421 SLC25A27O95847 323 aa16.21■□□□□ 0.19
LTBR-202ENST00000440421 FCER1AP12319 257 aa16.21■□□□□ 0.19
LTBR-202ENST00000440421 CACNB2Q08289 660 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms