RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 RASA1P20936 1047 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
UBE2F-214ENST00000440223 APOBRQ0VD83 1088 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 PKN2Q16513 984 aaKnown RBP18.72■□□□□ 0.59
UBE2F-214ENST00000440223 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 C17orf99Q6UX52 265 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 CD99L2Q8TCZ2 262 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 C12orf42Q96LP6 360 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 ZSCAN10Q96SZ4 725 aaPredicted RBP18.72■□□□□ 0.59
UBE2F-214ENST00000440223 MCOLN1Q9GZU1 580 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
UBE2F-214ENST00000440223 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 TNKSO95271 1327 aa18.72■□□□□ 0.59
UBE2F-214ENST00000440223 GOLGA8BA8MQT2 603 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 TFAP4Q01664 338 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
UBE2F-214ENST00000440223 ME3Q16798 604 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 SGMS1Q86VZ5 419 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 ACER1Q8TDN7 264 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 LARP6Q9BRS8 491 aaKnown RBP18.71■□□□□ 0.59
UBE2F-214ENST00000440223 KANSL2Q9H9L4 492 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 EMILIN3Q9NT22 766 aa18.71■□□□□ 0.59
UBE2F-214ENST00000440223 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
UBE2F-214ENST00000440223 PFKFB2O60825 505 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 HOXA7P31268 230 aaPredicted RBP18.7■□□□□ 0.58
UBE2F-214ENST00000440223 EVCP57679 992 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 LACTBP83111 547 aaPredicted RBP18.7■□□□□ 0.58
UBE2F-214ENST00000440223 IFIT1BQ5T764 474 aaKnown RBP18.7■□□□□ 0.58
UBE2F-214ENST00000440223 CCDC83Q8IWF9 413 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 IGDCC4Q8TDY8 1250 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 GTF3C6Q969F1 213 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 ASCC2Q9H1I8 757 aaPredicted RBP18.7■□□□□ 0.58
UBE2F-214ENST00000440223 LY9Q9HBG7 655 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 TRIM17Q9Y577 477 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
UBE2F-214ENST00000440223 PLIN4Q96Q06 1357 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 MGAMO43451 1857 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 LARGE1O95461 756 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 BCRP11274 1271 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 GCLCP48506 637 aaPredicted RBP18.69■□□□□ 0.58
UBE2F-214ENST00000440223 RCAN1P53805 252 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 STK3Q13188 491 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 ZKSCAN3Q9BRR0 538 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 EFCC1Q9HA90 598 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 TCP11L1Q9NUJ3 509 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 CIZ1Q9ULV3 898 aaPredicted RBP18.69■□□□□ 0.58
UBE2F-214ENST00000440223 SMC3Q9UQE7 1217 aa18.69■□□□□ 0.58
UBE2F-214ENST00000440223 ZSWIM8A7E2V4 1837 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L15C9J2P7 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L13C9JLJ4 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L11C9JVI0 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L18D6R9N7 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L22D6RA61 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L17D6RBQ6 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L19D6RCP7 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L20D6RJB6 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 ZBTB43O43298 467 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 VCAM1P19320 739 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 ATP2B2Q01814 1243 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 USP17L24Q0WX57 530 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 CPLX2Q6PUV4 134 aaKnown RBP18.68■□□□□ 0.58
UBE2F-214ENST00000440223 OTOP1Q7RTM1 612 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 CATIPQ7Z7H3 387 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 NEDD1Q8NHV4 660 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
UBE2F-214ENST00000440223 LPAR1Q92633 364 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 TMX2Q9Y320 296 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 KIF3AQ9Y496 699 aa18.68■□□□□ 0.58
UBE2F-214ENST00000440223 A0A1W2PRG0 241 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 GNRH1P01148 92 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 CALM1P0DP23 149 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 CALM2P0DP24 149 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 CALM3P0DP25 149 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
UBE2F-214ENST00000440223 PDIA3P30101 505 aaKnown RBP18.67■□□□□ 0.58
UBE2F-214ENST00000440223 SEC23AQ15436 765 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 FAM110CQ1W6H9 321 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 FBXO46Q6PJ61 603 aaPredicted RBP18.67■□□□□ 0.58
UBE2F-214ENST00000440223 APOA5Q6Q788 366 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 ENAHQ8N8S7 591 aaPredicted RBP18.67■□□□□ 0.58
UBE2F-214ENST00000440223 NECAB1Q8N987 351 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 ABHD8Q96I13 439 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 LLPHQ9BRT6 129 aaKnown RBP18.67■□□□□ 0.58
UBE2F-214ENST00000440223 GOPCQ9HD26 462 aa18.67■□□□□ 0.58
UBE2F-214ENST00000440223 GPHNQ9NQX3 736 aaPredicted RBP18.67■□□□□ 0.58
UBE2F-214ENST00000440223 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 CPLX1O14810 134 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 CDKL5O76039 1030 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 DDAH1O94760 285 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
UBE2F-214ENST00000440223 HERVK_113P62684 666 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 ANKRD13CQ8N6S4 541 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
UBE2F-214ENST00000440223 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 KAT14Q9H8E8 782 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms