RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 NYAP2Q9P242 653 aa23.61■■□□□ 1.37
SHROOM1-204ENST00000440118 SHCBP1Q8NEM2 672 aa23.6■■□□□ 1.37
SHROOM1-204ENST00000440118 CLIP2Q9UDT6 1046 aa23.6■■□□□ 1.37
SHROOM1-204ENST00000440118 CTDP1Q9Y5B0 961 aaPredicted RBP23.6■■□□□ 1.37
SHROOM1-204ENST00000440118 FRMPD3Q5JV73 1810 aa23.59■■□□□ 1.37
SHROOM1-204ENST00000440118 CEP95Q96GE4 821 aa23.59■■□□□ 1.37
SHROOM1-204ENST00000440118 CRISPLD2Q9H0B8 497 aa23.59■■□□□ 1.37
SHROOM1-204ENST00000440118 MROH8Q9H579 483 aa23.59■■□□□ 1.37
SHROOM1-204ENST00000440118 FBXO28Q9NVF7 368 aa23.59■■□□□ 1.37
SHROOM1-204ENST00000440118 SLC5A4Q9NY91 659 aa23.59■■□□□ 1.37
SHROOM1-204ENST00000440118 STRNO43815 780 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 TTLL1O95922 423 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 IGHDP01880 384 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 ADORA2AP29274 412 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 CACNB2Q08289 660 aaPredicted RBP23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 FAM47AQ5JRC9 791 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 MAP3K21Q5TCX8 1036 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 NECAB2Q7Z6G3 386 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 LRRC47Q8N1G4 583 aaKnown RBP23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 NUP88Q99567 741 aaPredicted RBP23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 SLF1Q9BQI6 1058 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 PPP1R9AQ9ULJ8 1098 aa23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 ZNFX1Q9P2E3 1918 aaKnown RBP23.58■■□□□ 1.37
SHROOM1-204ENST00000440118 PLIN4Q96Q06 1357 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 A0A0D9SFI3 127 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 TSPY2A6NKD2 308 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 F5H6K3 240 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 NDUFB10O96000 172 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 TFAP4Q01664 338 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 NUCB1Q02818 461 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 KLRC3Q07444 240 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 MCMDC2Q4G0Z9 681 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 UBE2Q1Q7Z7E8 422 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 ANKLE1Q8NAG6 615 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 FAM227BQ96M60 508 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 TOMM22Q9NS69 142 aa23.57■■□□□ 1.36
SHROOM1-204ENST00000440118 H0YGN5 161 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 SLC25A27O95847 323 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 CNGA1P29973 690 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 CCND3P30281 292 aaPredicted RBP23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 CTDSPL2Q05D32 466 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 NMIQ13287 307 aaPredicted RBP23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 TMEM132BQ14DG7 1078 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 PPP4R3BQ5MIZ7 849 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 VPS53Q5VIR6 699 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 NEDD1Q8NHV4 660 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 PAWRQ96IZ0 340 aaKnown RBP23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 MTMR4Q9NYA4 1195 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 NR2E3Q9Y5X4 410 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 PLXNA1Q9UIW2 1896 aa23.56■■□□□ 1.36
SHROOM1-204ENST00000440118 IGKV6D-41A0A0C4DH26 115 aa23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 VWA5AO00534 786 aa23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 HOXC6P09630 235 aa23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 FCER1AP12319 257 aa23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 COPB2P35606 906 aa23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 TICAM2Q86XR7 235 aa23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 DIS3LQ8TF46 1054 aaKnown RBP23.55■■□□□ 1.36
SHROOM1-204ENST00000440118 EVI5O60447 810 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 RANBP6O60518 1105 aaKnown RBP23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 STAT3P40763 770 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 MFAP1P55081 439 aaKnown RBP23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 IRX6P78412 446 aaPredicted RBP23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 NPLOC4Q8TAT6 608 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 MMP19Q99542 508 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 DIAPH3Q9NSV4 1193 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 FLRT1Q9NZU1 646 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 SYNPO2Q9UMS6 1093 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 STX8Q9UNK0 236 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 CCDC171Q6TFL3 1326 aa23.54■■□□□ 1.36
SHROOM1-204ENST00000440118 CYP2C19P33261 490 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 SLC4A3P48751 1232 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 IKQ13123 557 aaPredicted RBP23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 KCTD2Q14681 263 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 PLEKHM2Q8IWE5 1019 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 KIFC2Q96AC6 838 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 NBPF3Q9H094 633 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 ALPK3Q96L96 1907 aa23.53■■□□□ 1.36
SHROOM1-204ENST00000440118 FOXP2O15409 715 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 RRP12Q5JTH9 1297 aaKnown RBP23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 SLFN13Q68D06 897 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 RIOX2Q8IUF8 465 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 ABRAQ8N0Z2 381 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 PRPF38AQ8NAV1 312 aaKnown RBP23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 TEX13BQ9BXU2 312 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 C11orf49Q9H6J7 331 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 OGDHLQ9ULD0 1010 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 ADAMTS5Q9UNA0 930 aa23.52■■□□□ 1.36
SHROOM1-204ENST00000440118 ZBED4O75132 1171 aa23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 OLFML2BQ68BL8 750 aa23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 SNRNP48Q6IEG0 339 aaKnown RBP23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 ZNF589Q86UQ0 364 aaPredicted RBP23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 MKL1Q969V6 931 aa23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 FEM1BQ9UK73 627 aa23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.51■■□□□ 1.35
SHROOM1-204ENST00000440118 MSCO60682 206 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 HSPD1P10809 573 aaKnown RBP23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 BMP3P12645 472 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 SDSP20132 328 aa23.5■■□□□ 1.35
SHROOM1-204ENST00000440118 ALX1Q15699 326 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms