RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PDE1AP54750 535 aa24.24■■□□□ 1.47
NCKIPSD-206ENST00000439518 ZNF287Q9HBT7 754 aa24.24■■□□□ 1.47
NCKIPSD-206ENST00000439518 EVI5O60447 810 aa24.23■■□□□ 1.47
NCKIPSD-206ENST00000439518 PRDM1O75626 825 aa24.23■■□□□ 1.47
NCKIPSD-206ENST00000439518 PLS1Q14651 629 aa24.23■■□□□ 1.47
NCKIPSD-206ENST00000439518 TMEM132BQ14DG7 1078 aa24.23■■□□□ 1.47
NCKIPSD-206ENST00000439518 FAM83BQ5T0W9 1011 aa24.23■■□□□ 1.47
NCKIPSD-206ENST00000439518 ABRAQ8N0Z2 381 aa24.23■■□□□ 1.47
NCKIPSD-206ENST00000439518 FOXP2O15409 715 aa24.22■■□□□ 1.47
NCKIPSD-206ENST00000439518 SAMD1Q6SPF0 538 aaPredicted RBP24.22■■□□□ 1.47
NCKIPSD-206ENST00000439518 DPP9Q86TI2 863 aa24.22■■□□□ 1.47
NCKIPSD-206ENST00000439518 ZNF444Q8N0Y2 327 aaPredicted RBP24.22■■□□□ 1.47
NCKIPSD-206ENST00000439518 EVI5LQ96CN4 794 aa24.22■■□□□ 1.47
NCKIPSD-206ENST00000439518 PPP1R9AQ9ULJ8 1098 aa24.22■■□□□ 1.47
NCKIPSD-206ENST00000439518 F5H6K3 240 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 VWA5AO00534 786 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 COBLO75128 1261 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 CYP2C19P33261 490 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 KLRC3Q07444 240 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 OLFML2BQ68BL8 750 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 CHRDL2Q6WN34 429 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 NCAPG2Q86XI2 1143 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 MKL1Q969V6 931 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 NAPBQ9H115 298 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 C11orf49Q9H6J7 331 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 CLIP2Q9UDT6 1046 aa24.21■■□□□ 1.47
NCKIPSD-206ENST00000439518 RAD21O60216 631 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 SLC25A27O95847 323 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 NDUFB10O96000 172 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 CCDC129Q6ZRS4 1044 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 SMC5Q8IY18 1101 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 REPS2Q8NFH8 660 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 CEP95Q96GE4 821 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 NUP88Q99567 741 aaPredicted RBP24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 PRO3102Q9H379 93 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 MTMR4Q9NYA4 1195 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 ZNF214Q9UL59 606 aaPredicted RBP24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 ALPK3Q96L96 1907 aa24.2■■□□□ 1.46
NCKIPSD-206ENST00000439518 COL6A1P12109 1028 aa24.19■■□□□ 1.46
NCKIPSD-206ENST00000439518 PPARAQ07869 468 aa24.19■■□□□ 1.46
NCKIPSD-206ENST00000439518 RIOX2Q8IUF8 465 aa24.19■■□□□ 1.46
NCKIPSD-206ENST00000439518 TRPV1Q8NER1 839 aa24.19■■□□□ 1.46
NCKIPSD-206ENST00000439518 NEDD1Q8NHV4 660 aa24.19■■□□□ 1.46
NCKIPSD-206ENST00000439518 SYNPO2Q9UMS6 1093 aa24.19■■□□□ 1.46
NCKIPSD-206ENST00000439518 PLIN4Q96Q06 1357 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 PFASO15067 1338 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 FCER1AP12319 257 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 CYBAP13498 195 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 FXR1P51114 621 aaKnown RBP eCLIP24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 PDE4BQ07343 736 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 TICAM2Q86XR7 235 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 SLC5A4Q9NY91 659 aa24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 COL11A1P12107 1806 aaPredicted RBP24.18■■□□□ 1.46
NCKIPSD-206ENST00000439518 SLC3A2P08195 630 aaKnown RBP24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 STAT3P40763 770 aa24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 SLF1Q9BQI6 1058 aa24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 LNPKQ9C0E8 428 aa24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 RWDD1Q9H446 243 aaPredicted RBP24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 RBM27Q9P2N5 1060 aaKnown RBP24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 DDX20Q9UHI6 824 aaKnown RBP24.17■■□□□ 1.46
NCKIPSD-206ENST00000439518 MSCO60682 206 aa24.16■■□□□ 1.46
NCKIPSD-206ENST00000439518 TTLL1O95922 423 aa24.16■■□□□ 1.46
NCKIPSD-206ENST00000439518 FAM47AQ5JRC9 791 aa24.16■■□□□ 1.46
NCKIPSD-206ENST00000439518 PRPF38AQ8NAV1 312 aaKnown RBP24.16■■□□□ 1.46
NCKIPSD-206ENST00000439518 HELLSQ9NRZ9 838 aa24.16■■□□□ 1.46
NCKIPSD-206ENST00000439518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.16■■□□□ 1.46
NCKIPSD-206ENST00000439518 TSPY3P0CV98 308 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 TSPY8P0CW00 308 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 CNGA1P29973 690 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 TFAP4Q01664 338 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 VPS53Q5VIR6 699 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 GMCL1P1Q8NEA9 526 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 MAML3Q96JK9 1138 aa24.15■■□□□ 1.46
NCKIPSD-206ENST00000439518 IGHDP01880 384 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 COPB2P35606 906 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 ALX1Q15699 326 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 C7orf61Q8IZ16 206 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 EXOC6Q8TAG9 804 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 FAM227BQ96M60 508 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 MMP19Q99542 508 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 ANAPC4Q9UJX5 808 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 MYH4Q9Y623 1939 aa24.14■■□□□ 1.45
NCKIPSD-206ENST00000439518 FRMPD3Q5JV73 1810 aa24.13■■□□□ 1.45
NCKIPSD-206ENST00000439518 LRRC47Q8N1G4 583 aaKnown RBP24.13■■□□□ 1.45
NCKIPSD-206ENST00000439518 TEX13BQ9BXU2 312 aa24.13■■□□□ 1.45
NCKIPSD-206ENST00000439518 ZNFX1Q9P2E3 1918 aaKnown RBP24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 A0A0D9SFI3 127 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 ATP2A1O14983 1001 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 CTDSPL2Q05D32 466 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 KCTD2Q14681 263 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 B4GALNT3Q6L9W6 998 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 INCENPQ9NQS7 918 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 FEM1BQ9UK73 627 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 TACC3Q9Y6A5 838 aa24.12■■□□□ 1.45
NCKIPSD-206ENST00000439518 PGK2P07205 417 aa24.11■■□□□ 1.45
NCKIPSD-206ENST00000439518 NUCB1Q02818 461 aa24.11■■□□□ 1.45
NCKIPSD-206ENST00000439518 ZNF792Q3KQV3 632 aa24.11■■□□□ 1.45
NCKIPSD-206ENST00000439518 MCMDC2Q4G0Z9 681 aa24.11■■□□□ 1.45
NCKIPSD-206ENST00000439518 SLFN13Q68D06 897 aa24.11■■□□□ 1.45
NCKIPSD-206ENST00000439518 CHD1LQ86WJ1 897 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms