RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PRMT2P55345 433 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
LINC00399-201ENST00000439008 MTFR1Q15390 333 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 SLC9C1Q4G0N8 1177 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 MFSD6Q6ZSS7 791 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 REPS2Q8NFH8 660 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 USP6NLQ92738 828 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 MOV10L1Q9BXT6 1211 aaKnown RBP15.71■□□□□ 0.11
LINC00399-201ENST00000439008 HOXC10Q9NYD6 342 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 B4E1Z4 1266 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
LINC00399-201ENST00000439008 CYP21A2P08686 494 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 HOXD10P28358 340 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 GRK4P32298 578 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 TMEM132BQ14DG7 1078 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 MORN1Q5T089 497 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 GMCL1P1Q8NEA9 526 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 RAET1EQ8TD07 263 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 GTF3C2Q8WUA4 911 aaPredicted RBP15.7■□□□□ 0.1
LINC00399-201ENST00000439008 RUFY2Q8WXA3 655 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 ESYT1Q9BSJ8 1104 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 TCP11L1Q9NUJ3 509 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 STX8Q9UNK0 236 aa15.7■□□□□ 0.1
LINC00399-201ENST00000439008 ZNFX1Q9P2E3 1918 aaKnown RBP15.7■□□□□ 0.1
LINC00399-201ENST00000439008 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
LINC00399-201ENST00000439008 VWA5AO00534 786 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 ADCY3O60266 1144 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 RGS19P49795 217 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 TRIM32Q13049 653 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 IRF5Q13568 498 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 SLFN13Q68D06 897 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 MAP4K1Q92918 833 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 COA7Q96BR5 231 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
LINC00399-201ENST00000439008 SPATC1LQ9H0A9 340 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
LINC00399-201ENST00000439008 KDM4AO75164 1064 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 MCCP23508 829 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 MAPK4P31152 587 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 IMMTQ16891 758 aaKnown RBP15.68■□□□□ 0.1
LINC00399-201ENST00000439008 CYB5R4Q7L1T6 521 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 PLEKHH3Q7Z736 793 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 ZSWIM5Q9P217 1185 aa15.68■□□□□ 0.1
LINC00399-201ENST00000439008 ZNF214Q9UL59 606 aaPredicted RBP15.68■□□□□ 0.1
LINC00399-201ENST00000439008 PCP11498 1178 aaKnown RBP15.67■□□□□ 0.1
LINC00399-201ENST00000439008 CYP2B6P20813 491 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 CCL14Q16627 93 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 KCTD1Q719H9 257 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 TRIB2Q92519 343 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 SLF1Q9BQI6 1058 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 CTNNA3Q9UI47 895 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 MTMR7Q9Y216 660 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 RIPK3Q9Y572 518 aa15.67■□□□□ 0.1
LINC00399-201ENST00000439008 RBM8AQ9Y5S9 174 aaKnown RBP15.67■□□□□ 0.1
LINC00399-201ENST00000439008 BMP3P12645 472 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 ERCC3P19447 782 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 PTPREP23469 700 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 PLS1Q14651 629 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 TTBK2Q6IQ55 1244 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 MB21D1Q8N884 522 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 PXYLP1Q8TE99 480 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 ESR2Q92731 530 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 RNF41Q9H4P4 317 aaPredicted RBP15.66■□□□□ 0.1
LINC00399-201ENST00000439008 FLRT1Q9NZU1 646 aa15.66■□□□□ 0.1
LINC00399-201ENST00000439008 TMEM232C9JQI7 657 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 IGHA2P01877 340 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 INHAP05111 366 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 TOP1P11387 765 aaKnown RBP15.65■□□□□ 0.1
LINC00399-201ENST00000439008 EN2P19622 333 aaPredicted RBP15.65■□□□□ 0.1
LINC00399-201ENST00000439008 SNAP25P60880 206 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 CCNA1P78396 465 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 WDR78Q5VTH9 848 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 ENAHQ8N8S7 591 aaPredicted RBP15.65■□□□□ 0.1
LINC00399-201ENST00000439008 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
LINC00399-201ENST00000439008 SLAIN1Q8ND83 568 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 NPLOC4Q8TAT6 608 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 KIFC2Q96AC6 838 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 NUDT12Q9BQG2 462 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 UNC93B1Q9H1C4 597 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 SENP2Q9HC62 589 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
LINC00399-201ENST00000439008 ZNF236Q9UL36 1845 aa15.65■□□□□ 0.1
LINC00399-201ENST00000439008 SLC15A5A6NIM6 579 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 E7EWF7 191 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 COBLO75128 1261 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 CCL5P13501 91 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 TAL1P17542 331 aaPredicted RBP15.64■□□□□ 0.09
LINC00399-201ENST00000439008 SLC1A4P43007 532 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 MAP2K5Q13163 448 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 GRB14Q14449 540 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
LINC00399-201ENST00000439008 NBPF11Q86T75 865 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms