RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 CCDC91Q7Z6B0 441 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 FBXL16Q8N461 479 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 CTCFLQ8NI51 663 aaPredicted RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 MTRQ99707 1265 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 KDM6AO15550 1401 aaPredicted RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 B4DLN1 442 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 MBD4O95243 580 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 PHKG2P15735 406 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 CABP4P57796 275 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 PTPROQ16827 1216 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 TTMPQ5BVD1 217 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 TCP11X2Q5H9J9 407 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 WDR59Q6PJI9 974 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 TRIM75PA6NK02 468 aa15.02■□□□□ -0
ACTN1-204ENST00000438964 MINDY4BA8MYZ0 360 aa15.02■□□□□ -0
ACTN1-204ENST00000438964 MCM7P33993 719 aa15.02■□□□□ -0
ACTN1-204ENST00000438964 NFRKBQ6P4R8 1299 aa15.02■□□□□ -0
ACTN1-204ENST00000438964 CYP27B1O15528 508 aa15.02□□□□□ -0.01
ACTN1-204ENST00000438964 GUCY2FP51841 1108 aa15.02□□□□□ -0.01
ACTN1-204ENST00000438964 CTAGE1Q96RT6 745 aa15.02□□□□□ -0.01
ACTN1-204ENST00000438964 LUC7L2Q9Y383 392 aaKnown RBP15.02□□□□□ -0.01
ACTN1-204ENST00000438964 SLC4A4Q9Y6R1 1079 aa15.02□□□□□ -0.01
ACTN1-204ENST00000438964 PP2D1A8MPX8 630 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 VEGFAP15692 232 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-204ENST00000438964 SCP2P22307 547 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 ADD2P35612 726 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 PRCPP42785 496 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 TOM1L2Q6ZVM7 507 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 MAGEB6Q8N7X4 407 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 RASSF8Q8NHQ8 419 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 SPATA20Q8TB22 786 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 IFT81Q8WYA0 676 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 MS4A14Q96JA4 679 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 C4AP0C0L4 1744 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 C4BP0C0L5 1744 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 EIF3HO15372 352 aaKnown RBP eCLIP15.01□□□□□ -0.01
ACTN1-204ENST00000438964 PAK1Q13153 545 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 PTGDRQ13258 359 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 TRADDQ15628 312 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 TRIML1Q8N9V2 468 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 LRWD1Q9UFC0 647 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 CAPN6Q9Y6Q1 641 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 V9GY48 417 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-204ENST00000438964 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-204ENST00000438964 PDE6AP16499 860 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 TATP17735 454 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-204ENST00000438964 TRIM21P19474 475 aaKnown RBP15.01□□□□□ -0.01
ACTN1-204ENST00000438964 WTAPQ15007 396 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 CCDC96Q2M329 555 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 LDHAL6AQ6ZMR3 332 aa15.01□□□□□ -0.01
ACTN1-204ENST00000438964 MOCS3O95396 460 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 PLEKHA8P1O95397 391 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 HPDP32754 393 aaPredicted RBP15□□□□□ -0.01
ACTN1-204ENST00000438964 SUGP1Q8IWZ8 645 aaKnown RBP15□□□□□ -0.01
ACTN1-204ENST00000438964 OR8K1Q8NGG5 319 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 RUFY1Q96T51 708 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 CNNM1Q9NRU3 951 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 CYP2D7A0A087X1C5 515 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 PARP1P09874 1014 aaKnown RBP15□□□□□ -0.01
ACTN1-204ENST00000438964 IFNAR1P17181 557 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 TSR1Q2NL82 804 aaKnown RBP15□□□□□ -0.01
ACTN1-204ENST00000438964 IFNL3Q8IZI9 196 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 CRACR2BQ8N4Y2 399 aaPredicted RBP15□□□□□ -0.01
ACTN1-204ENST00000438964 OTUD6BQ8N6M0 293 aa15□□□□□ -0.01
ACTN1-204ENST00000438964 DDX24Q9GZR7 859 aaKnown RBP eCLIP15□□□□□ -0.015e-6■■■■■ 34.6
ACTN1-204ENST00000438964 MYO5AQ9Y4I1 1855 aaKnown RBP15□□□□□ -0.01
ACTN1-204ENST00000438964 CPP00450 1065 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 FAM153BP0C7A2 387 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 PSEN1P49768 467 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 PPFIA1Q13136 1202 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 FAM153CQ494X1 144 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 MFSD6Q6ZSS7 791 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 TMC4Q7Z404 712 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 FAM153AQ9UHL3 310 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 SUFUQ9UMX1 484 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 PSMD14O00487 310 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 KANK3Q6NY19 840 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 CEP57Q86XR8 500 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 IRF2BP1Q8IU81 584 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 BANK1Q8NDB2 785 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 VIPAS39Q9H9C1 493 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
ACTN1-204ENST00000438964 ENOX2Q16206 610 aaKnown RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 PIK3AP1Q6ZUJ8 805 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 PROSER2Q86WR7 435 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 SDR42E1Q8WUS8 393 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 RNPC3Q96LT9 517 aaKnown RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 BUB1O43683 1085 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 KIAA0754O94854 1291 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 NAP1L1P55209 391 aaKnown RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 EVX2Q03828 476 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 IFT88Q13099 833 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 TYW1BQ6NUM6 668 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms