RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 AXDND1Q5T1B0 1012 aaPredicted RBP12.5□□□□□ -0.41
LINC01516-201ENST00000436140 SPC24Q8NBT2 197 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 KCNG4Q8TDN1 519 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
LINC01516-201ENST00000436140 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 PHF20Q9BVI0 1012 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 HDAC9Q9UKV0 1011 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 SUGT1Q9Y2Z0 365 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 TTLL1O95922 423 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 CCDC192P0DO97 292 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 SLC1A4P43007 532 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 GRM4Q14833 912 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 PTPAQ15257 358 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
LINC01516-201ENST00000436140 USH1GQ495M9 461 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
LINC01516-201ENST00000436140 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
LINC01516-201ENST00000436140 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 WNT10BO00744 389 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 SYKP43405 635 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 AFMP43652 599 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 PTGDRQ13258 359 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 ABCB5Q2M3G0 1257 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
LINC01516-201ENST00000436140 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 BRMS1Q9HCU9 246 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
LINC01516-201ENST00000436140 PALM3A6NDB9 673 aaPredicted RBP12.49□□□□□ -0.41
LINC01516-201ENST00000436140 TRIM75PA6NK02 468 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
LINC01516-201ENST00000436140 VIL1P09327 827 aaKnown RBP12.49□□□□□ -0.41
LINC01516-201ENST00000436140 ICA1Q05084 483 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 PNOCQ13519 176 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 NPY5RQ15761 445 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 UBE2SQ16763 222 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 LONRF3Q496Y0 759 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
LINC01516-201ENST00000436140 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 SNED1Q8TER0 1413 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 COBLO75128 1261 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 GMPSP49915 693 aaPredicted RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 TGFB2P61812 414 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 DHX8Q14562 1220 aaKnown RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 BLIDQ8IZY5 108 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 DHX58Q96C10 678 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 FOXP1Q9H334 677 aaPredicted RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 ADAMTSL1Q8N6G6 1762 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 A0A1W2PRG0 241 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 PP2D1A8MPX8 630 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 YEATS4O95619 227 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 RASA3Q14644 834 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 SLFN13Q68D06 897 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 FMR1NBQ8N0W7 255 aaPredicted RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 PSMD1Q99460 953 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 MTA3Q9BTC8 594 aa12.48□□□□□ -0.41
LINC01516-201ENST00000436140 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
LINC01516-201ENST00000436140 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 COL4A5P29400 1685 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 F5H6K3 240 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 ZNF165P49910 485 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 KLRC3Q07444 240 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 RILPL1Q5EBL4 403 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 SIAH1Q8IUQ4 282 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 KRI1Q8N9T8 703 aaKnown RBP12.47□□□□□ -0.41
LINC01516-201ENST00000436140 ENGASEQ8NFI3 743 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 CNOT7Q9UIV1 285 aaKnown RBP12.47□□□□□ -0.41
LINC01516-201ENST00000436140 AP5Z1O43299 807 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 PTGER2P43116 358 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 CERS3Q8IU89 383 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 CNNM3Q8NE01 707 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 MYOZ2Q9NPC6 264 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 KCNH3Q9ULD8 1083 aa12.47□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 TNNI2P48788 182 aa12.46□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms