RNA–Protein interactions for RNA: ENST00000436041.5

PRAMEF27-201, Transcript of PRAME family member 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF27, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF27-201ENST00000436041 H7C1D1 291 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 PRPF3O43395 683 aaKnown RBP14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 FUT2Q10981 343 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 RBM26Q5T8P6 1007 aaKnown RBP14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 RBM43Q6ZSC3 357 aaKnown RBP14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 TMTC3Q6ZXV5 915 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 FERMT3Q86UX7 667 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 GPC2Q8N158 579 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 CMTR1Q8N1G2 835 aaKnown RBP14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 PYCARDQ9ULZ3 195 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 ZNF541Q9H0D2 1346 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 SHTN1A0MZ66 631 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 MPHOSPH10O00566 681 aaKnown RBP14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 TTLL1O95922 423 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 RESTQ13127 1097 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 TRIM29Q14134 588 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 GRM4Q14833 912 aa14.04□□□□□ -0.16
PRAMEF27-201ENST00000436041 CNTNAP1P78357 1384 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 KIF2AO00139 706 aaPredicted RBP14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 TBC1D12O60347 775 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 FOSBP53539 338 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 DNM1Q05193 864 aaKnown RBP14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 TERF2Q15554 542 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 KRT222Q8N1A0 295 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 SRBD1Q8N5C6 995 aaKnown RBP14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 ZNF397Q8NF99 534 aaPredicted RBP14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 TSC1Q92574 1164 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 LZTS2Q9BRK4 669 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 CLIP2Q9UDT6 1046 aa14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 V9GY48 417 aaPredicted RBP14.03□□□□□ -0.16
PRAMEF27-201ENST00000436041 PALM3A6NDB9 673 aaPredicted RBP14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 TUBB4AP04350 444 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 SLURP2P0DP57 97 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 YBX3P16989 372 aaKnown RBP eCLIP14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 TNFAIP1Q13829 316 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 SAMD7Q7Z3H4 446 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 KIF18AQ8NI77 898 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 MAD2L2Q9UI95 211 aa14.02□□□□□ -0.16
PRAMEF27-201ENST00000436041 FAM196BA6NMK8 535 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 XBP1P17861 261 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 GUCY1A2P33402 732 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 KRT85P78386 507 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 ABCB5Q2M3G0 1257 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 TBC1D10BQ4KMP7 808 aaPredicted RBP14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 KRT40Q6A162 431 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 ATL3Q6DD88 541 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 OTUD7BQ6GQQ9 843 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 TMEM179Q6ZVK1 233 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 ZNF771Q7L3S4 317 aaPredicted RBP14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 PLA2G4DQ86XP0 818 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 MKL1Q969V6 931 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 CABP5Q9NP86 173 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 GPRC5DQ9NZD1 345 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 CALCOCO1Q9P1Z2 691 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 CFAP45Q9UL16 551 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 VGLL3A8MV65 326 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 EGFRP00533 1210 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 MAP3K10Q02779 954 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 KIF4BQ2VIQ3 1234 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 CCDC112Q8NEF3 446 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 TMEM39BQ9GZU3 492 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 YY1AP1Q9H869 796 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 NYAP2Q9P242 653 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 PGAP2Q9UHJ9 254 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
PRAMEF27-201ENST00000436041 PARP1P09874 1014 aaKnown RBP14□□□□□ -0.17
PRAMEF27-201ENST00000436041 RASA3Q14644 834 aa14□□□□□ -0.17
PRAMEF27-201ENST00000436041 PKN1Q16512 942 aa14□□□□□ -0.17
PRAMEF27-201ENST00000436041 STAG2Q8N3U4 1231 aa14□□□□□ -0.17
PRAMEF27-201ENST00000436041 SCAND2PQ9GZW5 306 aaPredicted RBP14□□□□□ -0.17
PRAMEF27-201ENST00000436041 GJB4Q9NTQ9 266 aa14□□□□□ -0.17
PRAMEF27-201ENST00000436041 RNF181Q9P0P0 153 aa14□□□□□ -0.17
PRAMEF27-201ENST00000436041 KLRF2D3W0D1 207 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 AP5Z1O43299 807 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 SAFBQ15424 915 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 SARM1Q6SZW1 724 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 ARID3AQ99856 593 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 DDX19AQ9NUU7 478 aaKnown RBP13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 HACL1Q9UJ83 578 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 CNTNAP5Q8WYK1 1306 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 CLGNO14967 610 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 KIF23Q02241 960 aaPredicted RBP13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 MAP3K11Q16584 847 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 USP17L2Q6R6M4 530 aa13.99□□□□□ -0.17
PRAMEF27-201ENST00000436041 TIGD1Q96MW7 591 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms