RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 PROM2Q8N271 834 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 KCND1Q9NSA2 647 aa19.05■□□□□ 0.64
LIMK1-203ENST00000435201 VWA3AA6NCI4 1184 aa19.04■□□□□ 0.64
LIMK1-203ENST00000435201 UBASH3AP57075 661 aa19.04■□□□□ 0.64
LIMK1-203ENST00000435201 TPD52L1Q16890 204 aaPredicted RBP19.04■□□□□ 0.64
LIMK1-203ENST00000435201 ENOX1Q8TC92 643 aaKnown RBP19.04■□□□□ 0.64
LIMK1-203ENST00000435201 GPKOWQ92917 476 aaPredicted RBP eCLIP19.04■□□□□ 0.64
LIMK1-203ENST00000435201 SPZ1Q9BXG8 430 aa19.04■□□□□ 0.64
LIMK1-203ENST00000435201 A0A087X0B3 334 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 VEGFAP15692 232 aaPredicted RBP19.03■□□□□ 0.64
LIMK1-203ENST00000435201 NPR1P16066 1061 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 SFPQP23246 707 aaKnown RBP eCLIP19.03■□□□□ 0.64
LIMK1-203ENST00000435201 GTF2IP78347 998 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 GRAMD1CQ8IYS0 662 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 FANCLQ9NW38 375 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 DAGLAQ9Y4D2 1042 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 ERCC5P28715 1186 aaPredicted RBP19.03■□□□□ 0.64
LIMK1-203ENST00000435201 WWC2Q6AWC2 1192 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 PAGE5Q96GU1 130 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 BARHL2Q9NY43 387 aa19.03■□□□□ 0.64
LIMK1-203ENST00000435201 CCDC194A0A1B0GVG4 234 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 M0R2N6 131 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 PARP1P09874 1014 aaKnown RBP19.02■□□□□ 0.64
LIMK1-203ENST00000435201 SRGNP10124 158 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 TOP1P11387 765 aaKnown RBP19.02■□□□□ 0.64
LIMK1-203ENST00000435201 SMARCA1P28370 1054 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 MCM7P33993 719 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 CFAP100Q494V2 611 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 IQUBQ8NA54 791 aa19.02■□□□□ 0.64
LIMK1-203ENST00000435201 CCDC12Q8WUD4 166 aaPredicted RBP19.02■□□□□ 0.64
LIMK1-203ENST00000435201 C16orf45Q96MC5 204 aaPredicted RBP19.02■□□□□ 0.64
LIMK1-203ENST00000435201 PLIN4Q96Q06 1357 aa19.02■□□□□ 0.63
LIMK1-203ENST00000435201 STXBP3O00186 592 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 CYTH3O43739 400 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 ALDH1B1P30837 517 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 LONP1P36776 959 aaKnown RBP19.01■□□□□ 0.63
LIMK1-203ENST00000435201 KCNJ6P48051 423 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 NOVP48745 357 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 HEATR3Q7Z4Q2 680 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 GSDMAQ96QA5 445 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
LIMK1-203ENST00000435201 KLRF2D3W0D1 207 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 TNNT1P13805 278 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 DPYDQ12882 1025 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 SLC35G1Q2M3R5 365 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 ARMCX5Q6P1M9 558 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 VSTM4Q8IW00 320 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 FLAD1Q8NFF5 587 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 AKT1S1Q96B36 256 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 NFE2L3Q9Y4A8 694 aa19.01■□□□□ 0.63
LIMK1-203ENST00000435201 RIMBP2O15034 1052 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 PLSCR1O15162 318 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 RRP9O43818 475 aaKnown RBP19■□□□□ 0.63
LIMK1-203ENST00000435201 ZNF18P17022 549 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 PDE6BP35913 854 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 TXLNAP40222 546 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 AFMP43652 599 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 FMR1Q06787 632 aaKnown RBP eCLIP19■□□□□ 0.63
LIMK1-203ENST00000435201 E2F4Q16254 413 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 ZNF827Q17R98 1081 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 TYW1BQ6NUM6 668 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
LIMK1-203ENST00000435201 PCDHA6Q9UN73 950 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 PCDHA8Q9Y5H6 950 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
LIMK1-203ENST00000435201 MYH8P13535 1937 aa19■□□□□ 0.63
LIMK1-203ENST00000435201 ADAMTS3O15072 1205 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 C4orf32Q8N8J7 132 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 DPF2Q92785 391 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 CEP95Q96GE4 821 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 PAXBP1Q9Y5B6 917 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 EP400Q96L91 3159 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 LAD1O00515 517 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 DPP8Q6V1X1 898 aaPredicted RBP18.99■□□□□ 0.63
LIMK1-203ENST00000435201 COL23A1Q86Y22 540 aaPredicted RBP18.99■□□□□ 0.63
LIMK1-203ENST00000435201 CCAR2Q8N163 923 aaKnown RBP18.99■□□□□ 0.63
LIMK1-203ENST00000435201 CCDC112Q8NEF3 446 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 RRP36Q96EU6 259 aaKnown RBP18.99■□□□□ 0.63
LIMK1-203ENST00000435201 MTMR7Q9Y216 660 aa18.99■□□□□ 0.63
LIMK1-203ENST00000435201 IL17AQ16552 155 aa18.98■□□□□ 0.63
LIMK1-203ENST00000435201 ZMYND12Q9H0C1 365 aa18.98■□□□□ 0.63
LIMK1-203ENST00000435201 SEC63Q9UGP8 760 aaKnown RBP18.98■□□□□ 0.63
LIMK1-203ENST00000435201 C10orf71Q711Q0 1435 aa18.98■□□□□ 0.63
LIMK1-203ENST00000435201 RIOK3O14730 519 aaKnown RBP18.97■□□□□ 0.63
LIMK1-203ENST00000435201 GOLGA8HP0CJ92 632 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 CDK11BP21127 795 aaKnown RBP18.97■□□□□ 0.63
LIMK1-203ENST00000435201 PDXDC2PQ6P474 469 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 NYAP1Q6ZVC0 841 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 RASGRP4Q8TDF6 673 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 TTF2Q9UNY4 1162 aaKnown RBP18.97■□□□□ 0.63
LIMK1-203ENST00000435201 MYO3BQ8WXR4 1341 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 hCG_1984214I3L0E3 225 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 KIF2AO00139 706 aaPredicted RBP18.97■□□□□ 0.63
LIMK1-203ENST00000435201 GTPBP6O43824 516 aaPredicted RBP18.97■□□□□ 0.63
LIMK1-203ENST00000435201 GNA11P29992 359 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 NAPAP54920 295 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 GABPAQ06546 454 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 PTPN14Q15678 1187 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 DTHD1Q6ZMT9 781 aa18.97■□□□□ 0.63
LIMK1-203ENST00000435201 KRT25Q7Z3Z0 450 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms