RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 LONP1P36776 959 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 PPP4CP60510 307 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 TFAP4Q01664 338 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 KLHL10Q6JEL2 608 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 WDR66Q8TBY9 1149 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 PCDHA4Q9UN74 947 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 NHSQ6T4R5 1651 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 LRRC10BA6NIK2 292 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 MCM7P33993 719 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 STX17P56962 302 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 CCDC178Q5BJE1 867 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 SMYD4Q8IYR2 804 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 DAGLBQ8NCG7 672 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 PNMA1Q8ND90 353 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 PRDM4Q9UKN5 801 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 LEMD3Q9Y2U8 911 aa18.23■□□□□ 0.51
HLA-DQB2-231ENST00000435145 ITIH6Q6UXX5 1313 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 TADA3O75528 432 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 GNAQP50148 359 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 SLC35G1Q2M3R5 365 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 FAM177A1Q8N128 213 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 ZNF446Q9NWS9 450 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 RWDD2AQ9UIY3 292 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 LDHBP07195 334 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 IGSF22Q8N9C0 903 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 KIFC2Q96AC6 838 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 WDR24Q96S15 920 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 MAD2L2Q9UI95 211 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 JAG2Q9Y219 1238 aa18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB2-231ENST00000435145 MAP3K9P80192 1104 aa18.21■□□□□ 0.51
HLA-DQB2-231ENST00000435145 TYW1BQ6NUM6 668 aa18.21■□□□□ 0.51
HLA-DQB2-231ENST00000435145 STAG2Q8N3U4 1231 aa18.21■□□□□ 0.51
HLA-DQB2-231ENST00000435145 SH3RF3Q8TEJ3 882 aaPredicted RBP18.21■□□□□ 0.51
HLA-DQB2-231ENST00000435145 CTNND2Q9UQB3 1225 aa18.21■□□□□ 0.51
HLA-DQB2-231ENST00000435145 MFAP3LO75121 409 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 URI1O94763 535 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GSTO1P78417 241 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 RBL2Q08999 1139 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GRAPQ13588 217 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GALNT17Q6IS24 598 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GRAPLQ8TC17 118 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 STAMQ92783 540 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 DYNLL2Q96FJ2 89 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 BLZF1Q9H2G9 400 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 EFCAB8A8MWE9 144 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 USP5P45974 858 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GNG11P61952 73 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 PPFIBP1Q86W92 1011 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CCDC51Q96ER9 411 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 RMND1Q9NWS8 449 aa18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 BAZ2BQ9UIF8 2168 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB2-231ENST00000435145 MTF1Q14872 753 aa18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 ARHGAP29Q52LW3 1261 aa18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 MRPL44Q9H9J2 332 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 ADGRG1Q9Y653 693 aa18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 THSD7AQ9UPZ6 1657 aa18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 NAV1Q8NEY1 1877 aa18.19■□□□□ 0.5
HLA-DQB2-231ENST00000435145 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 PALM3A6NDB9 673 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CYTH3O43739 400 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 BAG3O95817 575 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GYPCP04921 128 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CCDC175P0C221 793 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CASQ1P31415 396 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 SPAG1Q07617 926 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 PAK1Q13153 545 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 KRT31Q15323 416 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GRIK5Q16478 980 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 RRAGBQ5VZM2 374 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 RAD9BQ6WBX8 426 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 KRT222Q8N1A0 295 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 DESI2Q9BSY9 194 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 MRFAP1Q9Y605 127 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 LY75O60449 1722 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 SOWAHDA6NJG2 315 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 RPN1P04843 607 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CLCN6P51797 869 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 GABPB1Q06547 395 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 WWC2Q6AWC2 1192 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 MNS1Q8NEH6 495 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CCDC148Q8NFR7 591 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 UBXN4Q92575 508 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 CARD6Q9BX69 1037 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 BARHL2Q9NY43 387 aa18.18■□□□□ 0.5
HLA-DQB2-231ENST00000435145 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms