RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	LONP1	P36776	959 aa	Known RBP	18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	PPP4C	P60510	307 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	TFAP4	Q01664	338 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	KLHL10	Q6JEL2	608 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	WDR66	Q8TBY9	1149 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	PCDHA4	Q9UN74	947 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	NHS	Q6T4R5	1651 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	FAM205A	Q6ZU69	1335 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	LRRC10B	A6NIK2	292 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	MCM7	P33993	719 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	STX17	P56962	302 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	CCDC178	Q5BJE1	867 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	AMIGO3	Q86WK7	504 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	DAGLB	Q8NCG7	672 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	PNMA1	Q8ND90	353 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	GTPBP4	Q9BZE4	634 aa	Known RBP	18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	PRDM4	Q9UKN5	801 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	LEMD3	Q9Y2U8	911 aa		18.23	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	ITIH6	Q6UXX5	1313 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	TADA3	O75528	432 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	GNAQ	P50148	359 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	SLC35G1	Q2M3R5	365 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	C15orf52	Q6ZUT6	534 aa	Known RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	FAM177A1	Q8N128	213 aa	Predicted RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	CCDC24	Q8N4L8	307 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	NAA15	Q9BXJ9	866 aa	Known RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	ZNF446	Q9NWS9	450 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	LIMA1	Q9UHB6	759 aa	Known RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	RWDD2A	Q9UIY3	292 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	LDHB	P07195	334 aa	Known RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	IGSF22	Q8N9C0	903 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	ARHGEF1	Q92888	912 aa	Known RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	KIFC2	Q96AC6	838 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	WDR24	Q96S15	920 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	MAD2L2	Q9UI95	211 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	JAG2	Q9Y219	1238 aa		18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	RTCB	Q9Y3I0	505 aa	Known RBP	18.22	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	MAP3K9	P80192	1104 aa		18.21	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	TYW1B	Q6NUM6	668 aa		18.21	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	STAG2	Q8N3U4	1231 aa		18.21	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.21	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	CTNND2	Q9UQB3	1225 aa		18.21	■□□□□ 0.51
HLA-DQB2-231	ENST00000435145	MFAP3L	O75121	409 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	URI1	O94763	535 aa	Predicted RBP	18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GSTO1	P78417	241 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RBL2	Q08999	1139 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GRAP	Q13588	217 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GALNT17	Q6IS24	598 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GRAPL	Q8TC17	118 aa	Predicted RBP	18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	STAM	Q92783	540 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	DYNLL2	Q96FJ2	89 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	BLZF1	Q9H2G9	400 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	EFCAB8	A8MWE9	144 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	USP5	P45974	858 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GNG11	P61952	73 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	FILIP1L	Q4L180	1135 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	PPFIBP1	Q86W92	1011 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CCDC51	Q96ER9	411 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RMND1	Q9NWS8	449 aa		18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.2	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	MTF1	Q14872	753 aa		18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ARHGAP29	Q52LW3	1261 aa		18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	MRPL44	Q9H9J2	332 aa	Known RBP	18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CCNL1	Q9UK58	526 aa	Predicted RBP	18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	ADGRG1	Q9Y653	693 aa		18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	THSD7A	Q9UPZ6	1657 aa		18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	NAV1	Q8NEY1	1877 aa		18.19	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	TAF1L	Q8IZX4	1826 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	PALM3	A6NDB9	673 aa	Predicted RBP	18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CYTH3	O43739	400 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	BAG3	O95817	575 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GYPC	P04921	128 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CCDC175	P0C221	793 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CASQ1	P31415	396 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SPAG1	Q07617	926 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	PAK1	Q13153	545 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	KRT31	Q15323	416 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GRIK5	Q16478	980 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RRAGB	Q5VZM2	374 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RAD9B	Q6WBX8	426 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	KRT222	Q8N1A0	295 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	DESI2	Q9BSY9	194 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	MRFAP1	Q9Y605	127 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	LY75	O60449	1722 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SOWAHD	A6NJG2	315 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	RPN1	P04843	607 aa	Known RBP	18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CLCN6	P51797	869 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	GABPB1	Q06547	395 aa	Predicted RBP	18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	NAALADL2	Q58DX5	795 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	WWC2	Q6AWC2	1192 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	SLC51A	Q86UW1	340 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	MNS1	Q8NEH6	495 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CCDC148	Q8NFR7	591 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	UBXN4	Q92575	508 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	CARD6	Q9BX69	1037 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	BARHL2	Q9NY43	387 aa		18.18	■□□□□ 0.5
HLA-DQB2-231	ENST00000435145	PCDHA6	Q9UN73	950 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms