RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 ATG4CQ96DT6 458 aa17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PARK7Q99497 189 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PAGR1Q9BTK6 254 aa17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SH2D4AQ9H788 454 aa17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 BTBD7Q9P203 1132 aa17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SMCHD1A6NHR9 2005 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 FLOT1O75955 427 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 GOLGA8HP0CJ92 632 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 TOP1P11387 765 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 IQCA1Q86XH1 822 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 RAB11FIP4Q86YS3 637 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 GMCL1P1Q8NEA9 526 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 LPAR1Q92633 364 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 UBAC1Q9BSL1 405 aa17.74■□□□□ 0.43
HLA-DQB1-205ENST00000434651 WDR46O15213 610 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 TAL1P17542 331 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 OSBPP22059 807 aa17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SLC16A2P36021 539 aa17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 TSGA10IPQ3SY00 556 aa17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 COL13A1Q5TAT6 717 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 JAKMIP1Q96N16 626 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 NEK1Q96PY6 1258 aa17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 ISY1Q9ULR0 285 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-205ENST00000434651 RNF20Q5VTR2 975 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 TTC14Q96N46 770 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 LY9Q9HBG7 655 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 GPCPD1Q9NPB8 672 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 BAZ2BQ9UIF8 2168 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 TMEM232C9JQI7 657 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PDHBP11177 359 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 BMP3P12645 472 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 DSG3P32926 999 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SLC1A4P43007 532 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 EXOSC10Q01780 885 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SP3Q02447 781 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 COG2Q14746 738 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 UBE2Q2Q8WVN8 375 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 ANKS1AQ92625 1134 aa17.72■□□□□ 0.43
HLA-DQB1-205ENST00000434651 FKTNO75072 461 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 ZKSCAN1P17029 563 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 RXRAP19793 462 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 KIFC2Q96AC6 838 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PORCNQ9H237 461 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
HLA-DQB1-205ENST00000434651 SH2B2O14492 632 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 MCM5P33992 734 aa17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 LACTBP83111 547 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 CCDC96Q2M329 555 aa17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 GMCL1Q96IK5 515 aa17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 TRIM47Q96LD4 638 aa17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 UBA5Q9GZZ9 404 aa17.7■□□□□ 0.42
HLA-DQB1-205ENST00000434651 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 WTAPQ15007 396 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 SLC35G1Q2M3R5 365 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 PPP1R9AQ9ULJ8 1098 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 MGAMO43451 1857 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 A0A0G2JMZ2 1700 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 ERVK-9P63128 1117 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 ERVK-24P63145 666 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 TMEM132BQ14DG7 1078 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 REPS2Q8NFH8 660 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 SLF1Q9BQI6 1058 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 ADAMTS5Q9UNA0 930 aa17.69■□□□□ 0.42
HLA-DQB1-205ENST00000434651 VWA5AO00534 786 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 CCDC144CPQ8IYA2 1237 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 HOXC10Q9NYD6 342 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 SYNPO2Q9UMS6 1093 aa17.68■□□□□ 0.42
HLA-DQB1-205ENST00000434651 PSMC4P43686 418 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 TROAPQ12815 778 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 IKQ13123 557 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 PLS1Q14651 629 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 FAM110CQ1W6H9 321 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 RIPK3Q9Y572 518 aa17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 MKI67P46013 3256 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-205ENST00000434651 RPS6KB1P23443 525 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms