RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CCNT1O60563 726 aaKnown RBP17.65■□□□□ 0.42
SCARF1-203ENST00000434376 UBA7P41226 1012 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 RBM6P78332 1123 aaKnown RBP17.65■□□□□ 0.42
SCARF1-203ENST00000434376 GABPB1Q06547 395 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-203ENST00000434376 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-203ENST00000434376 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 ATRIPQ8WXE1 791 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 CEP95Q96GE4 821 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 PIGSQ96S52 555 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 ZHX3Q9H4I2 956 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 ATP8A2Q9NTI2 1148 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 XDHP47989 1333 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 CNTNAP5Q8WYK1 1306 aa17.65■□□□□ 0.42
SCARF1-203ENST00000434376 USP17L5A8MUK1 530 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 CAVIN2O95810 425 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 KIF5BP33176 963 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 STAT6P42226 847 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 TXKP42681 527 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 E4F1Q66K89 784 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-203ENST00000434376 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-203ENST00000434376 SRPRBQ9Y5M8 271 aaKnown RBP17.64■□□□□ 0.41
SCARF1-203ENST00000434376 CDK8P49336 464 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 KCTD1Q719H9 257 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-203ENST00000434376 ARPP21Q9UBL0 812 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-203ENST00000434376 WDR19Q8NEZ3 1342 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 TNNI2P48788 182 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 ARHGAP29Q52LW3 1261 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 BLIDQ8IZY5 108 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 PAGE5Q96GU1 130 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 PHF20Q9BVI0 1012 aa17.64■□□□□ 0.41
SCARF1-203ENST00000434376 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-203ENST00000434376 PRPF3O43395 683 aaKnown RBP17.63■□□□□ 0.41
SCARF1-203ENST00000434376 CYTH3O43739 400 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 IDEP14735 1019 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 TECP42680 631 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 DDR1Q08345 913 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 WWC2Q6AWC2 1192 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 MNS1Q8NEH6 495 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 PLEKHG2Q9H7P9 1386 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 HSD3B7Q9H2F3 369 aa17.63■□□□□ 0.41
SCARF1-203ENST00000434376 APBA3O96018 575 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 DYMQ7RTS9 669 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 N4BP3O15049 544 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 GNG11P61952 73 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 FUT2Q10981 343 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 UBE2SQ16763 222 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 TTBK2Q6IQ55 1244 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 TFRCP02786 760 aaKnown RBP17.62■□□□□ 0.41
SCARF1-203ENST00000434376 DPYDQ12882 1025 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 ENOX2Q16206 610 aaKnown RBP17.62■□□□□ 0.41
SCARF1-203ENST00000434376 SARM1Q6SZW1 724 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 HINFPQ9BQA5 517 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 CNTNAP4Q9C0A0 1308 aa17.62■□□□□ 0.41
SCARF1-203ENST00000434376 ACTN4O43707 911 aaKnown RBP17.61■□□□□ 0.41
SCARF1-203ENST00000434376 PPP1R13BQ96KQ4 1090 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 MED15Q96RN5 788 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.61■□□□□ 0.41
SCARF1-203ENST00000434376 MORC2Q9Y6X9 1032 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-203ENST00000434376 SMCO2A6NFE2 343 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 IL17AQ16552 155 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 SLC10A5Q5PT55 438 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 ERO1AQ96HE7 468 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 TIGD1Q96MW7 591 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 INTS13Q9NVM9 706 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
SCARF1-203ENST00000434376 TFR2Q9UP52 801 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
SCARF1-203ENST00000434376 ZYXQ15942 572 aaKnown RBP17.6■□□□□ 0.41
SCARF1-203ENST00000434376 TBC1D16Q8TBP0 767 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 TMX4Q9H1E5 349 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-203ENST00000434376 USP40Q9NVE5 1235 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 TBC1D7Q9P0N9 293 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 SEC63Q9UGP8 760 aaKnown RBP17.6■□□□□ 0.41
SCARF1-203ENST00000434376 TUBE1Q9UJT0 475 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 SOWAHDA6NJG2 315 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 ATRNO75882 1429 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 RASA1P20936 1047 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-203ENST00000434376 NFIAQ12857 509 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 SPICE1Q8N0Z3 855 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 MMP10P09238 476 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
SCARF1-203ENST00000434376 CHRNA5P30532 468 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 GSDMDP57764 484 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 DTHD1Q6ZMT9 781 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 TOGARAM2Q6ZUX3 1019 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 UBXN4Q92575 508 aa17.6■□□□□ 0.41
SCARF1-203ENST00000434376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCARF1-203ENST00000434376 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 SYNRGQ9UMZ2 1314 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 LDHCP07864 332 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 AKR1B1P15121 316 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms