RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 CEP57L1Q8IYX8 460 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 CNNM3Q8NE01 707 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 USP40Q9NVE5 1235 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 MAD2L2Q9UI95 211 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-212ENST00000432645 TRIM75PA6NK02 468 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 CACNB3P54284 484 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 SATB1Q01826 763 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 PFKFB3Q16875 520 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-212ENST00000432645 POTEAQ6S8J7 498 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 CLEC10AQ8IUN9 316 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 DHX40Q8IX18 779 aaKnown RBP9.52□□□□□ -0.89
HDAC9-212ENST00000432645 RASGRP4Q8TDF6 673 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 CEP95Q96GE4 821 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 ROBO3Q96MS0 1386 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 CSRNP2Q9H175 543 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 ZNF287Q9HBT7 754 aa9.52□□□□□ -0.89
HDAC9-212ENST00000432645 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
HDAC9-212ENST00000432645 CYTH3O43739 400 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 PTPREP23469 700 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-212ENST00000432645 SLC35G1Q2M3R5 365 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 USP17L2Q6R6M4 530 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 VAT1LQ9HCJ6 419 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 RGS17Q9UGC6 210 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-212ENST00000432645 NRBP1Q9UHY1 535 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 LAMB1P07942 1786 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 RBM5P52756 815 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC9-212ENST00000432645 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 HEATR3Q7Z4Q2 680 aa9.51□□□□□ -0.89
HDAC9-212ENST00000432645 CAVIN2O95810 425 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 ZNF75DP51815 510 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 TCP10Q12799 353 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 NFIAQ12857 509 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 SLC15A2Q16348 729 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 EP400NLQ6ZTU2 488 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 METTL16Q86W50 562 aaKnown RBP9.5□□□□□ -0.89
HDAC9-212ENST00000432645 FOXP4Q8IVH2 680 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-212ENST00000432645 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 NAT10Q9H0A0 1025 aaKnown RBP9.5□□□□□ -0.89
HDAC9-212ENST00000432645 CEP131Q9UPN4 1083 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 KLRF2D3W0D1 207 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 PTGS1P23219 599 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 MCM7P33993 719 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 GRM4Q14833 912 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 CDC42EP5Q6NZY7 148 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 KRBA2Q6ZNG9 492 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 TNFRSF25Q93038 417 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 TCP11L1Q9NUJ3 509 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 SRPRBQ9Y5M8 271 aaKnown RBP9.5□□□□□ -0.89
HDAC9-212ENST00000432645 SNED1Q8TER0 1413 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 AOC3Q16853 763 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 CCDC186Q7Z3E2 898 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
HDAC9-212ENST00000432645 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 ANKS1AQ92625 1134 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 TEKT1Q969V4 418 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 UBA5Q9GZZ9 404 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
HDAC9-212ENST00000432645 LOC102724159A0A0B4J2E5 919 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 VWA3AA6NCI4 1184 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 FAM196BA6NMK8 535 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 DYNC1I1O14576 645 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 PTGDRQ13258 359 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 PWP2Q15269 919 aaKnown RBP9.49□□□□□ -0.89
HDAC9-212ENST00000432645 TTC38Q5R3I4 469 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 WWC2Q6AWC2 1192 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 APOBEC3HQ6NTF7 200 aaKnown RBP9.49□□□□□ -0.89
HDAC9-212ENST00000432645 PLA2G4DQ86XP0 818 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 OTUD6BQ8N6M0 293 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 TIGD1Q96MW7 591 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 EFCC1Q9HA90 598 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 CLIP2Q9UDT6 1046 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 PCDHA5Q9Y5H7 936 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 LTBP1Q14766 1721 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 FRMPD2Q68DX3 1309 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-212ENST00000432645 USP17L5A8MUK1 530 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 ECE2O60344 883 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 AKR1B1P15121 316 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 CRKP46108 304 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 NLRP12P59046 1061 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 KIAA2012Q0VF49 1180 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 CCDC178Q5BJE1 867 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 BLIDQ8IZY5 108 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 MYH6P13533 1939 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 LRRC37AA6NMS7 1700 aa9.49□□□□□ -0.89
HDAC9-212ENST00000432645 NAV1Q8NEY1 1877 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 FAM237AA0A1B0GTK4 181 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 PALM3A6NDB9 673 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-212ENST00000432645 MPHOSPH10O00566 681 aaKnown RBP9.48□□□□□ -0.89
HDAC9-212ENST00000432645 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
HDAC9-212ENST00000432645 PODNQ7Z5L7 613 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 DHX58Q96C10 678 aa9.48□□□□□ -0.89
HDAC9-212ENST00000432645 TSPYL1Q9H0U9 437 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms