RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
PRKDC-203ENST00000432581 GOPCQ9HD26 462 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 ADAMTS5Q9UNA0 930 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 SLC4A4Q9Y6R1 1079 aa17.9■□□□□ 0.46
PRKDC-203ENST00000432581 A0A0C4DFX4 3053 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 CYP2D7A0A087X1C5 515 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
PRKDC-203ENST00000432581 EEF2P13639 858 aaKnown RBP17.89■□□□□ 0.45
PRKDC-203ENST00000432581 COPB2P35606 906 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 LRRC41Q15345 812 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 PRAMEF19Q5SWL8 479 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 C1orf53Q5VUE5 145 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 RIOX2Q8IUF8 465 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 MMP19Q99542 508 aa17.89■□□□□ 0.45
PRKDC-203ENST00000432581 KCTD2Q14681 263 aa17.88■□□□□ 0.45
PRKDC-203ENST00000432581 CTR9Q6PD62 1173 aa17.88■□□□□ 0.45
PRKDC-203ENST00000432581 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
PRKDC-203ENST00000432581 ARPP21Q9UBL0 812 aaPredicted RBP17.88■□□□□ 0.45
PRKDC-203ENST00000432581 PPP1R9AQ9ULJ8 1098 aa17.88■□□□□ 0.45
PRKDC-203ENST00000432581 DIS3Q9Y2L1 958 aaKnown RBP17.88■□□□□ 0.45
PRKDC-203ENST00000432581 RLFQ13129 1914 aa17.88■□□□□ 0.45
PRKDC-203ENST00000432581 VWA5AO00534 786 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 RARBP10826 455 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 STAT3P40763 770 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 ADCYAP1R1P41586 468 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 TRIM60Q495X7 471 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 FAM47AQ5JRC9 791 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 LRRCC1Q9C099 1032 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 XPNPEP3Q9NQH7 507 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
PRKDC-203ENST00000432581 SMIM22K7EJ46 135 aa17.86■□□□□ 0.45
PRKDC-203ENST00000432581 ZNF697Q5TEC3 545 aa17.86■□□□□ 0.45
PRKDC-203ENST00000432581 TINF2Q9BSI4 451 aa17.86■□□□□ 0.45
PRKDC-203ENST00000432581 PUS7LQ9H0K6 701 aaKnown RBP17.86■□□□□ 0.45
PRKDC-203ENST00000432581 PDLIM7Q9NR12 457 aa17.86■□□□□ 0.45
PRKDC-203ENST00000432581 PHF24Q9UPV7 400 aa17.86■□□□□ 0.45
PRKDC-203ENST00000432581 ROBO3Q96MS0 1386 aa17.86■□□□□ 0.45
PRKDC-203ENST00000432581 RAD21O60216 631 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 CHGBP05060 677 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 PGK2P07205 417 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 ZNF792Q3KQV3 632 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 FAM83BQ5T0W9 1011 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
PRKDC-203ENST00000432581 RNF180Q86T96 592 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 FERMT2Q96AC1 680 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 GUCD1Q96NT3 240 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 ZNF214Q9UL59 606 aaPredicted RBP17.85■□□□□ 0.45
PRKDC-203ENST00000432581 DNAH12Q6ZR08 3092 aa17.85■□□□□ 0.45
PRKDC-203ENST00000432581 SHHQ15465 462 aa17.84■□□□□ 0.45
PRKDC-203ENST00000432581 SBK1Q52WX2 424 aa17.84■□□□□ 0.45
PRKDC-203ENST00000432581 GIMAP6Q6P9H5 292 aa17.84■□□□□ 0.45
PRKDC-203ENST00000432581 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
PRKDC-203ENST00000432581 REPS2Q8NFH8 660 aa17.84■□□□□ 0.45
PRKDC-203ENST00000432581 BADQ92934 168 aa17.84■□□□□ 0.45
PRKDC-203ENST00000432581 AKR1A1P14550 325 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 TLE2Q04725 743 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 STRBPQ96SI9 672 aaKnown RBP17.83■□□□□ 0.44
PRKDC-203ENST00000432581 SLF1Q9BQI6 1058 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.83■□□□□ 0.44
PRKDC-203ENST00000432581 TEX13BQ9BXU2 312 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 NYAP2Q9P242 653 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 TACC3Q9Y6A5 838 aa17.83■□□□□ 0.44
PRKDC-203ENST00000432581 TRIM43BA6NCK2 446 aa17.82■□□□□ 0.44
PRKDC-203ENST00000432581 PGK1P00558 417 aa17.82■□□□□ 0.44
PRKDC-203ENST00000432581 ZNF865P0CJ78 1059 aaPredicted RBP17.82■□□□□ 0.44
PRKDC-203ENST00000432581 C9orf50Q5SZB4 431 aa17.82■□□□□ 0.44
PRKDC-203ENST00000432581 TRIM43Q96BQ3 446 aaPredicted RBP17.82■□□□□ 0.44
PRKDC-203ENST00000432581 FAM161BQ96MY7 647 aa17.82■□□□□ 0.44
PRKDC-203ENST00000432581 SYNGAP1Q96PV0 1343 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 CLTBP09497 229 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 TAL1P17542 331 aaPredicted RBP17.81■□□□□ 0.44
PRKDC-203ENST00000432581 RASA1P20936 1047 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 SMAD3P84022 425 aaKnown RBP17.81■□□□□ 0.44
PRKDC-203ENST00000432581 SNRNP48Q6IEG0 339 aaKnown RBP17.81■□□□□ 0.44
PRKDC-203ENST00000432581 SH3RF1Q7Z6J0 888 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRKDC-203ENST00000432581 KBTBD3Q8NAB2 608 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
PRKDC-203ENST00000432581 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 RCAN3Q9UKA8 241 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 LTBP2Q14767 1821 aa17.81■□□□□ 0.44
PRKDC-203ENST00000432581 MYH8P13535 1937 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
PRKDC-203ENST00000432581 A0A1W2PQ45 241 aaPredicted RBP17.8■□□□□ 0.44
PRKDC-203ENST00000432581 A0A1W2PQY0 241 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 GSG1L2A8MUP6 293 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 F5H6K3 240 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 ATP2A1O14983 1001 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 SMARCA5O60264 1052 aaPredicted RBP17.8■□□□□ 0.44
PRKDC-203ENST00000432581 NDUFB10O96000 172 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 KLRC3Q07444 240 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 PRPF38AQ8NAV1 312 aaKnown RBP17.8■□□□□ 0.44
PRKDC-203ENST00000432581 APPBP2Q92624 585 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
PRKDC-203ENST00000432581 MINDY4BA8MYZ0 360 aa17.79■□□□□ 0.44
PRKDC-203ENST00000432581 ZBED4O75132 1171 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms