RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 MTMR4Q9NYA4 1195 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 WNT7AO00755 349 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 HOXA13P31271 388 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-205ENST00000431183 NDUFA8P51970 172 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 PLS1Q14651 629 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 NBPF12Q5TAG4 269 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-205ENST00000431183 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 EEF2KMTQ96G04 330 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 DNAJC18Q9H819 358 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L18D6R9N7 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L22D6RA61 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L17D6RBQ6 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L19D6RCP7 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L20D6RJB6 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 CYTH3O43739 400 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 ORC4O43929 436 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 TTLL1O95922 423 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L24Q0WX57 530 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 SBK1Q52WX2 424 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 DHX58Q96C10 678 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 SYT17Q9BSW7 474 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 GOLPH3LQ9H4A5 285 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 ZNF541Q9H0D2 1346 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 SALL1Q9NSC2 1324 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 OFD1O75665 1012 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 INPP5BP32019 993 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
SMPD4-205ENST00000431183 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
SMPD4-205ENST00000431183 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 ANAPC4Q9UJX5 808 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 LY75O60449 1722 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 PEX10O60683 326 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 MMP1P03956 469 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 TGFB2P61812 414 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 WWC2Q6AWC2 1192 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 LUZP1Q86V48 1076 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 TRPM4Q8TD43 1214 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 PRDM4Q9UKN5 801 aa12.92□□□□□ -0.34
SMPD4-205ENST00000431183 GAKO14976 1311 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 UQCRHLA0A096LP55 91 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 UQCRHP07919 91 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 CALM1P0DP23 149 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 CALM2P0DP24 149 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 CALM3P0DP25 149 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 TNIP1Q15025 636 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 POLD4Q9HCU8 107 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 BECN2A8MW95 431 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 F5H6K3 240 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 CFBP00751 764 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 KLRC3Q07444 240 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 FAM83BQ5T0W9 1011 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
SMPD4-205ENST00000431183 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 ERCC3P19447 782 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 PTMSP20962 102 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 PRELPP51888 382 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 CCDC125Q86Z20 511 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 EPSTI1Q96J88 318 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 CHD4Q14839 1912 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 POLR2DO15514 142 aaKnown RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 DGKHQ86XP1 1220 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 ZNF830Q96NB3 372 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 SERPINA10Q9UK55 444 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 FOXN1O15353 648 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 PDHBP11177 359 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 PTGER2P43116 358 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 SYKP43405 635 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 SP4Q02446 784 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 FMR1Q06787 632 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 PKN1Q16512 942 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 ANO6Q4KMQ2 910 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
SMPD4-205ENST00000431183 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
SMPD4-205ENST00000431183 ZHX3Q9H4I2 956 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms