RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IDI2Q9BXS1 227 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 UBA5Q9GZZ9 404 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 CBX8Q9HC52 389 aa19.13■□□□□ 0.65
USHBP1-203ENST00000431146 FBXO2Q9UK22 296 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-203ENST00000431146 TRIM75PA6NK02 468 aa19.12■□□□□ 0.65
USHBP1-203ENST00000431146 HPSEQ9Y251 543 aa19.12■□□□□ 0.65
USHBP1-203ENST00000431146 AP5Z1O43299 807 aa19.12■□□□□ 0.65
USHBP1-203ENST00000431146 PDHBP11177 359 aa19.12■□□□□ 0.65
USHBP1-203ENST00000431146 ZNF174Q15697 407 aa19.12■□□□□ 0.65
USHBP1-203ENST00000431146 C11orf57Q6ZUT1 292 aaPredicted RBP19.12■□□□□ 0.65
USHBP1-203ENST00000431146 RSBN1LQ6PCB5 846 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-203ENST00000431146 TTLL1O95922 423 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 PTPREP23469 700 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 BLIDQ8IZY5 108 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 SPZ1Q9BXG8 430 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 EHD4Q9H223 541 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 DHX36Q9H2U1 1008 aaKnown RBP19.1■□□□□ 0.65
USHBP1-203ENST00000431146 PIM2Q9P1W9 311 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 GREB1LQ9C091 1923 aaPredicted RBP19.1■□□□□ 0.65
USHBP1-203ENST00000431146 STXBP3O00186 592 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 ADCY5O95622 1261 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 ZNF165P49910 485 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 GRIPAP1Q4V328 841 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 LZTS2Q9BRK4 669 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 PI4KBQ9UBF8 816 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 NOL7Q9UMY1 257 aaKnown RBP19.1■□□□□ 0.65
USHBP1-203ENST00000431146 CEP131Q9UPN4 1083 aa19.1■□□□□ 0.65
USHBP1-203ENST00000431146 MYO3BQ8WXR4 1341 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 CLRN2A0PK11 232 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 STX1AQ16623 288 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 TTC38Q5R3I4 469 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 PIGSQ96S52 555 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 GPCPD1Q9NPB8 672 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 SH3GLB2Q9NR46 395 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 BARHL2Q9NY43 387 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 KCNH3Q9ULD8 1083 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 PCDHA4Q9UN74 947 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 BIN1O00499 593 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 CALML3P27482 149 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 R3HDM1Q15032 1099 aaKnown RBP19.09■□□□□ 0.65
USHBP1-203ENST00000431146 USP49Q70CQ1 688 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 CSRNP2Q9H175 543 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 RRAGDQ9NQL2 400 aaPredicted RBP19.09■□□□□ 0.65
USHBP1-203ENST00000431146 KIAA1468Q9P260 1216 aa19.09■□□□□ 0.65
USHBP1-203ENST00000431146 SRPRBQ9Y5M8 271 aaKnown RBP19.09■□□□□ 0.65
USHBP1-203ENST00000431146 TCP10L2B9ZVM9 353 aa19.08■□□□□ 0.64
USHBP1-203ENST00000431146 VIL1P09327 827 aaKnown RBP19.08■□□□□ 0.64
USHBP1-203ENST00000431146 LONRF3Q496Y0 759 aa19.08■□□□□ 0.64
USHBP1-203ENST00000431146 CERKLQ49MI3 558 aaPredicted RBP19.08■□□□□ 0.64
USHBP1-203ENST00000431146 RRP36Q96EU6 259 aaKnown RBP19.08■□□□□ 0.64
USHBP1-203ENST00000431146 TRIM34Q9BYJ4 488 aa19.08■□□□□ 0.64
USHBP1-203ENST00000431146 FAM237AA0A1B0GTK4 181 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 RAD21O60216 631 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 GDF11O95390 407 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 POLD1P28340 1107 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 SPDYE2BA6NHP3 402 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 SPDYE6P0CI01 402 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 MCM7P33993 719 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 NAPAP54920 295 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 ISM2Q6H9L7 571 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 NIM1KQ8IY84 436 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 GMLQ99445 158 aa19.07■□□□□ 0.64
USHBP1-203ENST00000431146 TGFB2P61812 414 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 PTGDRQ13258 359 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 PNOCQ13519 176 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 DALRD3Q5D0E6 543 aaKnown RBP19.06■□□□□ 0.64
USHBP1-203ENST00000431146 TTBK2Q6IQ55 1244 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 PDILTQ8N807 584 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 CCDC148Q8NFR7 591 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 MTFR1LQ9H019 292 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 SEC63Q9UGP8 760 aaKnown RBP19.06■□□□□ 0.64
USHBP1-203ENST00000431146 PCDHA6Q9UN73 950 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 PCDHA8Q9Y5H6 950 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 M0R2N6 131 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 FOXN1O15353 648 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 SNHG28P0DPA3 235 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 PDE4CQ08493 712 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 KCTD1Q719H9 257 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 CCDC125Q86Z20 511 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 CCDC17Q96LX7 622 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 CSRNP1Q96S65 589 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 ZNRF3Q9ULT6 936 aa19.06■□□□□ 0.64
USHBP1-203ENST00000431146 POLR2DO15514 142 aaKnown RBP19.05■□□□□ 0.64
USHBP1-203ENST00000431146 SLC16A2P36021 539 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 SEPT2Q15019 361 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 DLGAP5Q15398 846 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 ASPRV1Q53RT3 343 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 OGFOD1Q8N543 542 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 CNNM3Q8NE01 707 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 EPSTI1Q96J88 318 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 TIGD1Q96MW7 591 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 RIOX1Q9H6W3 641 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 ANO10Q9NW15 660 aa19.05■□□□□ 0.64
USHBP1-203ENST00000431146 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
USHBP1-203ENST00000431146 NPM3O75607 178 aaKnown RBP19.04■□□□□ 0.64
USHBP1-203ENST00000431146 EEF2P13639 858 aaKnown RBP19.04■□□□□ 0.64
USHBP1-203ENST00000431146 ZNF543Q08ER8 600 aa19.04■□□□□ 0.64
USHBP1-203ENST00000431146 CCDC96Q2M329 555 aa19.04■□□□□ 0.64
USHBP1-203ENST00000431146 DPCR1Q3MIW9 517 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms