RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 STAG1Q8WVM7 1258 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 RPGRIP1Q96KN7 1286 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 SEMA3EO15041 775 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 LSP1P33241 339 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 HDLBPQ00341 1268 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 CCDC13Q8IYE1 715 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 HSF2BPO75031 334 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 CASP7P55210 303 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 OR8K1Q8NGG5 319 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 ZNF473Q8WTR7 871 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 SYMPKQ92797 1274 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 VEZTQ9HBM0 779 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 NEBLO76041 1014 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 CXCR5P32302 372 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 CEP85LQ5SZL2 805 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 IQCA1Q86XH1 822 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 GPIHBP1Q8IV16 184 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 IGDCC4Q8TDY8 1250 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 APPBP2Q92624 585 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 VCPKMTQ9H867 229 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 SLC40A1Q9NP59 571 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 LUC7L2Q9Y383 392 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 LTN1O94822 1766 aa12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 DDX60Q8IY21 1712 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 AFDNP55196 1824 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-209ENST00000429836 IL15P40933 162 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 HSPA2P54652 639 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 CCDC70Q6NSX1 233 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 CREG2Q8IUH2 290 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 WNT7AO00755 349 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 KRT86O43790 486 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 ZNF496Q96IT1 587 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 FAXDC2Q96IV6 333 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 EPN3Q9H201 632 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 WDR19Q8NEZ3 1342 aa12.4□□□□□ -0.42
SEMA4D-209ENST00000429836 TRIM49BA6NDI0 452 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 EYA2O00167 538 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 TRIM14Q14142 442 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 E2F5Q15329 346 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 SPRED3Q2MJR0 410 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 LRCH2Q5VUJ6 765 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 CCDC85AQ96PX6 553 aaPredicted RBP12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 GSDMAQ96QA5 445 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 DDX20Q9UHI6 824 aaKnown RBP12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.43
SEMA4D-209ENST00000429836 ATXN2Q99700 1313 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 RASSF9O75901 435 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 EPB41P11171 864 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 KLK7P49862 253 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 SMTNP53814 917 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 EARS2Q5JPH6 523 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 CCT8L2Q96SF2 557 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 GDAQ9Y2T3 454 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 EID1Q9Y6B2 187 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 C5P01031 1676 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 EPHB4P54760 987 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 PAK1Q13153 545 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 PTGISQ16647 500 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 NFRKBQ6P4R8 1299 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 MICALCLQ6ZW33 695 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 KRT26Q7Z3Y9 468 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 MMGT1Q8N4V1 131 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 SPATA4Q8NEY3 305 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 MYCBPAPQ8TBZ2 947 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 SCLT1Q96NL6 688 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
SEMA4D-209ENST00000429836 XDHP47989 1333 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 WDR17Q8IZU2 1322 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 ESYT3A0FGR9 886 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 IFIT3O14879 490 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 FAM153BP0C7A2 387 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 FAM153CQ494X1 144 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 IQCEQ6IPM2 695 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
SEMA4D-209ENST00000429836 FAM228AQ86W67 206 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms