RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 CASP1P29466 404 aa15.84■□□□□ 0.13
NCBP2-205ENST00000428425 SLF2Q8IX21 1173 aa15.84■□□□□ 0.13
NCBP2-205ENST00000428425 DHX58Q96C10 678 aa15.84■□□□□ 0.13
NCBP2-205ENST00000428425 MAN1B1Q9UKM7 699 aa15.84■□□□□ 0.13
NCBP2-205ENST00000428425 VWA3AA6NCI4 1184 aa15.83■□□□□ 0.13
NCBP2-205ENST00000428425 TPM3P06753 285 aa15.83■□□□□ 0.13
NCBP2-205ENST00000428425 ALDH1B1P30837 517 aa15.83■□□□□ 0.13
NCBP2-205ENST00000428425 MCM7P33993 719 aa15.83■□□□□ 0.13
NCBP2-205ENST00000428425 R3HDM1Q15032 1099 aaKnown RBP15.83■□□□□ 0.13
NCBP2-205ENST00000428425 HEATR3Q7Z4Q2 680 aa15.83■□□□□ 0.13
NCBP2-205ENST00000428425 BLIDQ8IZY5 108 aa15.83■□□□□ 0.13
NCBP2-205ENST00000428425 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.13
NCBP2-205ENST00000428425 KLRF2D3W0D1 207 aa15.83■□□□□ 0.12
NCBP2-205ENST00000428425 M0R2N6 131 aa15.83■□□□□ 0.12
NCBP2-205ENST00000428425 CHRNA5P30532 468 aa15.83■□□□□ 0.12
NCBP2-205ENST00000428425 ATP2C1P98194 919 aaPredicted RBP15.83■□□□□ 0.12
NCBP2-205ENST00000428425 FILIP1Q7Z7B0 1213 aa15.83■□□□□ 0.12
NCBP2-205ENST00000428425 IFNKQ9P0W0 207 aa15.83■□□□□ 0.12
NCBP2-205ENST00000428425 SCN9AQ15858 1988 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 STXBP3O00186 592 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 AKR1B1P15121 316 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 EIF6P56537 245 aaKnown RBP15.82■□□□□ 0.12
NCBP2-205ENST00000428425 GABPAQ06546 454 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 NFIAQ12857 509 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 ZNF287Q9HBT7 754 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 USP40Q9NVE5 1235 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 PCDHA4Q9UN74 947 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
NCBP2-205ENST00000428425 USP17L5A8MUK1 530 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 NT5C2P49902 561 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 CCDC178Q5BJE1 867 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
NCBP2-205ENST00000428425 CDC42EP5Q6NZY7 148 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 ZFPM1Q8IX07 1006 aa15.82■□□□□ 0.12
NCBP2-205ENST00000428425 MORC2Q9Y6X9 1032 aaPredicted RBP15.82■□□□□ 0.12
NCBP2-205ENST00000428425 SMC2O95347 1197 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 AFMP43652 599 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 SARSP49591 514 aaKnown RBP15.81■□□□□ 0.12
NCBP2-205ENST00000428425 CACNB3P54284 484 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 PTPN21Q16825 1174 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
NCBP2-205ENST00000428425 DPF2Q92785 391 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 PCDHA6Q9UN73 950 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 PCDHA8Q9Y5H6 950 aa15.81■□□□□ 0.12
NCBP2-205ENST00000428425 IKBKBO14920 756 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 GNAQP50148 359 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 FMR1Q06787 632 aaKnown RBP eCLIP15.8■□□□□ 0.12
NCBP2-205ENST00000428425 HSP90AA4PQ58FG1 418 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 NT5DC1Q5TFE4 455 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 ELOA2Q8IYF1 753 aaPredicted RBP15.8■□□□□ 0.12
NCBP2-205ENST00000428425 C4orf32Q8N8J7 132 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 STAMQ92783 540 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 FERMT2Q96AC1 680 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 MED15Q96RN5 788 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 SH3GLB2Q9NR46 395 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 BARHL2Q9NY43 387 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
NCBP2-205ENST00000428425 PARP1P09874 1014 aaKnown RBP15.8■□□□□ 0.12
NCBP2-205ENST00000428425 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
NCBP2-205ENST00000428425 CALML3P27482 149 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 CDC25AP30304 524 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 NOVP48745 357 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 MYL5Q02045 173 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 LRRC8AQ8IWT6 810 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 VAT1LQ9HCJ6 419 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 SUGT1Q9Y2Z0 365 aa15.8■□□□□ 0.12
NCBP2-205ENST00000428425 G3V3G9 751 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 TOP1P11387 765 aaKnown RBP15.79■□□□□ 0.12
NCBP2-205ENST00000428425 MORC3Q14149 939 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 DNTTIP2Q5QJE6 756 aaKnown RBP15.79■□□□□ 0.12
NCBP2-205ENST00000428425 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 TRMT44Q8IYL2 757 aaKnown RBP15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 PAGE5Q96GU1 130 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SPZ1Q9BXG8 430 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 PDGFDQ9GZP0 370 aaPredicted RBP15.79■□□□□ 0.12
NCBP2-205ENST00000428425 FANCLQ9NW38 375 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 MTMR4Q9NYA4 1195 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SMTNL1A8MU46 457 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SHMT1P34896 483 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 TRAPPC10P48553 1259 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 FANCCQ00597 558 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 INF2Q27J81 1249 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SHROOM1Q2M3G4 852 aaPredicted RBP15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 SPATA20Q8TB22 786 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 PIGSQ96S52 555 aa15.79■□□□□ 0.12
NCBP2-205ENST00000428425 OSBPL5Q9H0X9 879 aaPredicted RBP15.79■□□□□ 0.12
NCBP2-205ENST00000428425 BMP15O95972 392 aa15.78■□□□□ 0.12
NCBP2-205ENST00000428425 MYH8P13535 1937 aa15.78■□□□□ 0.12
NCBP2-205ENST00000428425 CRKP46108 304 aa15.78■□□□□ 0.12
NCBP2-205ENST00000428425 TEKT1Q969V4 418 aa15.78■□□□□ 0.12
NCBP2-205ENST00000428425 TMEM60Q9H2L4 133 aa15.78■□□□□ 0.12
NCBP2-205ENST00000428425 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms