RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 DPP9Q86TI2 863 aa24.5■■□□□ 1.51
HSPG2-205ENST00000427897 APBA2Q99767 749 aa24.5■■□□□ 1.51
HSPG2-205ENST00000427897 MOV10L1Q9BXT6 1211 aaKnown RBP24.5■■□□□ 1.51
HSPG2-205ENST00000427897 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.5■■□□□ 1.51
HSPG2-205ENST00000427897 STRNO43815 780 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 FGAP02671 866 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 HSPD1P10809 573 aaKnown RBP24.49■■□□□ 1.51
HSPG2-205ENST00000427897 CAPN2P17655 700 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 RRP12Q5JTH9 1297 aaKnown RBP24.49■■□□□ 1.51
HSPG2-205ENST00000427897 TRIB2Q92519 343 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 MROH8Q9H579 483 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 FBXO28Q9NVF7 368 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 RPTORQ8N122 1335 aa24.49■■□□□ 1.51
HSPG2-205ENST00000427897 PLXNB2O15031 1838 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 ERCC3P19447 782 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 LRRC47Q8N1G4 583 aaKnown RBP24.48■■□□□ 1.51
HSPG2-205ENST00000427897 SHCBP1Q8NEM2 672 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 NUP88Q99567 741 aaPredicted RBP24.48■■□□□ 1.51
HSPG2-205ENST00000427897 SLC5A4Q9NY91 659 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 ANAPC4Q9UJX5 808 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 STX8Q9UNK0 236 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 MYH4Q9Y623 1939 aa24.48■■□□□ 1.51
HSPG2-205ENST00000427897 IGKV6D-41A0A0C4DH26 115 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 SLC25A27O95847 323 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 NDUFB10O96000 172 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 MFSD14CQ5VZR4 134 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 ZNF589Q86UQ0 364 aaPredicted RBP24.47■■□□□ 1.51
HSPG2-205ENST00000427897 MKL1Q969V6 931 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 INCENPQ9NQS7 918 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 PPP1R9AQ9ULJ8 1098 aa24.47■■□□□ 1.51
HSPG2-205ENST00000427897 TNRC18O15417 2968 aaPredicted RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 GREB1LQ9C091 1923 aaPredicted RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 FOXP2O15409 715 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 PRKAR2AP13861 404 aaKnown RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 SLC4A3P48751 1232 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 TRIM32Q13049 653 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 IKQ13123 557 aaPredicted RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 PRPF38BQ5VTL8 546 aaKnown RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 SLFN13Q68D06 897 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 PRPF38AQ8NAV1 312 aaKnown RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 USP6NLQ92738 828 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 SLF1Q9BQI6 1058 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 SYNPO2Q9UMS6 1093 aa24.46■■□□□ 1.51
HSPG2-205ENST00000427897 KIAA0100Q14667 2235 aaKnown RBP24.46■■□□□ 1.51
HSPG2-205ENST00000427897 VWA5AO00534 786 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 ZBED4O75132 1171 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 FCER1AP12319 257 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 HAND2P61296 217 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 TMEM132BQ14DG7 1078 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 CCL14Q16627 93 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 DPF3Q92784 378 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 KIFC2Q96AC6 838 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 SHISA4Q96DD7 197 aa24.45■■□□□ 1.5
HSPG2-205ENST00000427897 PAK6Q9NQU5 681 aaPredicted RBP24.45■■□□□ 1.5
HSPG2-205ENST00000427897 ZNF213O14771 459 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 FARP2O94887 1054 aaPredicted RBP24.44■■□□□ 1.5
HSPG2-205ENST00000427897 STAT3P40763 770 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 GRB14Q14449 540 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 MFSD6Q6ZSS7 791 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 GMCL1P1Q8NEA9 526 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 HTATIP2Q9BUP3 242 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 FEM1BQ9UK73 627 aa24.44■■□□□ 1.5
HSPG2-205ENST00000427897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.44■■□□□ 1.5
HSPG2-205ENST00000427897 PLIN4Q96Q06 1357 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 BMP3P12645 472 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 ADORA2AP29274 412 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 COPB2P35606 906 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 CACNB2Q08289 660 aaPredicted RBP24.43■■□□□ 1.5
HSPG2-205ENST00000427897 CHMP4CQ96CF2 233 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 RNF41Q9H4P4 317 aaPredicted RBP24.43■■□□□ 1.5
HSPG2-205ENST00000427897 MTMR7Q9Y216 660 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 RLFQ13129 1914 aa24.43■■□□□ 1.5
HSPG2-205ENST00000427897 ORC4O43929 436 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 PDE4AP27815 886 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 CNGA1P29973 690 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 TTC22Q5TAA0 569 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 CPXCR1Q8N123 301 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 MMP19Q99542 508 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 ADAMTS5Q9UNA0 930 aa24.42■■□□□ 1.5
HSPG2-205ENST00000427897 ZMYM6O95789 1325 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 SLC1A4P43007 532 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 KCTD2Q14681 263 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 RIOX2Q8IUF8 465 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 NPLOC4Q8TAT6 608 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 CHURC1Q8WUH1 139 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 A0A0G2JMZ2 1700 aa24.41■■□□□ 1.5
HSPG2-205ENST00000427897 COL11A1P12107 1806 aaPredicted RBP24.4■■□□□ 1.5
HSPG2-205ENST00000427897 HOXC6P09630 235 aa24.4■■□□□ 1.5
HSPG2-205ENST00000427897 PCP11498 1178 aaKnown RBP24.4■■□□□ 1.5
HSPG2-205ENST00000427897 AKNAD1Q5T1N1 836 aa24.4■■□□□ 1.5
HSPG2-205ENST00000427897 ABRAQ8N0Z2 381 aa24.4■■□□□ 1.5
HSPG2-205ENST00000427897 RUFY2Q8WXA3 655 aa24.4■■□□□ 1.5
HSPG2-205ENST00000427897 CTNNA3Q9UI47 895 aa24.4■■□□□ 1.5
HSPG2-205ENST00000427897 PARP14Q460N5 1801 aa24.4■■□□□ 1.5
HSPG2-205ENST00000427897 TMEM232C9JQI7 657 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 NMT2O60551 498 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 MCCP23508 829 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 STAT2P52630 851 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 MAP3K21Q5TCX8 1036 aa24.39■■□□□ 1.49
HSPG2-205ENST00000427897 SNRNP48Q6IEG0 339 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms