RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 CNMDO75829 334 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 CTGFP29279 349 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 DSG3P32926 999 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 RASGRP2Q7LDG7 609 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 RALYLQ86SE5 291 aaKnown RBP25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 CD99L2Q8TCZ2 262 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 ERO1AQ96HE7 468 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 USP26Q9BXU7 913 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 FBXO28Q9NVF7 368 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 HOXC10Q9NYD6 342 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 PLXNB2O15031 1838 aa25.3■■□□□ 1.64
RPUSD3-205ENST00000427174 RAD21O60216 631 aa25.29■■□□□ 1.64
RPUSD3-205ENST00000427174 PEX10O60683 326 aa25.29■■□□□ 1.64
RPUSD3-205ENST00000427174 FLOT1O75955 427 aa25.29■■□□□ 1.64
RPUSD3-205ENST00000427174 COL13A1Q5TAT6 717 aaPredicted RBP25.29■■□□□ 1.64
RPUSD3-205ENST00000427174 RABGAP1Q9Y3P9 1069 aa25.29■■□□□ 1.64
RPUSD3-205ENST00000427174 SNHG28P0DPA3 235 aa25.28■■□□□ 1.64
RPUSD3-205ENST00000427174 BMP3P12645 472 aa25.28■■□□□ 1.64
RPUSD3-205ENST00000427174 UBAC1Q9BSL1 405 aa25.28■■□□□ 1.64
RPUSD3-205ENST00000427174 ARHGAP39Q9C0H5 1083 aa25.28■■□□□ 1.64
RPUSD3-205ENST00000427174 PPP1R9AQ9ULJ8 1098 aa25.28■■□□□ 1.64
RPUSD3-205ENST00000427174 MCCP23508 829 aa25.27■■□□□ 1.64
RPUSD3-205ENST00000427174 IGDCC4Q8TDY8 1250 aa25.27■■□□□ 1.64
RPUSD3-205ENST00000427174 ATG4CQ96DT6 458 aa25.27■■□□□ 1.64
RPUSD3-205ENST00000427174 MTA3Q9BTC8 594 aa25.27■■□□□ 1.64
RPUSD3-205ENST00000427174 BTBD7Q9P203 1132 aa25.27■■□□□ 1.64
RPUSD3-205ENST00000427174 ZNFX1Q9P2E3 1918 aaKnown RBP25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 SMCHD1A6NHR9 2005 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 PLA2G6O60733 806 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 ERVK-9P63128 1117 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 ERVK-24P63145 666 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 Q3C1V9 767 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 ADCK5Q3MIX3 580 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 CHST3Q7LGC8 479 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 CTU1Q7Z7A3 348 aaKnown RBP25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 DCAF4Q8WV16 495 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 SNX14Q9Y5W7 946 aa25.26■■□□□ 1.63
RPUSD3-205ENST00000427174 PDHBP11177 359 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 ZKSCAN1P17029 563 aaPredicted RBP25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 SLC1A4P43007 532 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 OTOP1Q7RTM1 612 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 PNMA1Q8ND90 353 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 REPS2Q8NFH8 660 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 GPRC5AQ8NFJ5 357 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 TRIM47Q96LD4 638 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 SLF1Q9BQI6 1058 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 SENP2Q9HC62 589 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 FEM1BQ9UK73 627 aa25.25■■□□□ 1.63
RPUSD3-205ENST00000427174 MCM5P33992 734 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 KRT32Q14532 448 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 C8orf34Q49A92 452 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 MB21D1Q8N884 522 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 PRPF38AQ8NAV1 312 aaKnown RBP25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 NEK1Q96PY6 1258 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 PAGR1Q9BTK6 254 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 MYH6P13533 1939 aa25.24■■□□□ 1.63
RPUSD3-205ENST00000427174 VWA5AO00534 786 aa25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 IFIT3O14879 490 aaKnown RBP25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 PRC1O43663 620 aa25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 PSMC4P43686 418 aa25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 KIF22Q14807 665 aa25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 IFIT1BQ5T764 474 aaKnown RBP25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 KCTD1Q719H9 257 aa25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 KAT14Q9H8E8 782 aa25.23■■□□□ 1.63
RPUSD3-205ENST00000427174 WDR19Q8NEZ3 1342 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 TMEM232C9JQI7 657 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 GNRH1P01148 92 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 EXOSC10Q01780 885 aaKnown RBP25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 ZNF543Q08ER8 600 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 BTNL9Q6UXG8 535 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 EFCC1Q9HA90 598 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 LY9Q9HBG7 655 aa25.22■■□□□ 1.63
RPUSD3-205ENST00000427174 SEC24BO95487 1268 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 STAT2P52630 851 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 TMEM132BQ14DG7 1078 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 SART3Q15020 963 aaKnown RBP25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 FAM160B2Q86V87 743 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 CHMP4CQ96CF2 233 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 TMEM87BQ96K49 555 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 PORCNQ9H237 461 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 GPHNQ9NQX3 736 aaPredicted RBP25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 ZNF214Q9UL59 606 aaPredicted RBP25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 MTMR7Q9Y216 660 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 TRIM17Q9Y577 477 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 CENPFP49454 3210 aa25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 BAZ2BQ9UIF8 2168 aaKnown RBP25.21■■□□□ 1.63
RPUSD3-205ENST00000427174 SH2B2O14492 632 aaPredicted RBP25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 FCGRTP55899 365 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 WTAPQ15007 396 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 ARHGEF6Q15052 776 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 TMEM67Q5HYA8 995 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 CHURC1Q8WUH1 139 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 SPATC1LQ9H0A9 340 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 ZNF236Q9UL36 1845 aa25.2■■□□□ 1.62
RPUSD3-205ENST00000427174 ERICH2A1L162 156 aa25.19■■□□□ 1.62
RPUSD3-205ENST00000427174 CCDC96Q2M329 555 aa25.19■■□□□ 1.62
RPUSD3-205ENST00000427174 TTBK2Q6IQ55 1244 aa25.19■■□□□ 1.62
RPUSD3-205ENST00000427174 DHX32Q7L7V1 743 aaKnown RBP25.19■■□□□ 1.62
RPUSD3-205ENST00000427174 MOV10L1Q9BXT6 1211 aaKnown RBP25.19■■□□□ 1.62
RPUSD3-205ENST00000427174 SLC38A10Q9HBR0 1119 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms