RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 FLOT1O75955 427 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 FCER1AP12319 257 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 LRRC41Q15345 812 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 PRAMEF19Q5SWL8 479 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 RIOX2Q8IUF8 465 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 MIER1Q8N108 512 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 GUCD1Q96NT3 240 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 DNAJC2Q99543 621 aaKnown RBP10.68□□□□□ -0.7
COPS6-204ENST00000426712 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 SH2D4AQ9H788 454 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 KANSL2Q9H9L4 492 aa10.68□□□□□ -0.7
COPS6-204ENST00000426712 KBTBD13C9JR72 458 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 VWA5AO00534 786 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 MBD4O95243 580 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 EEF2P13639 858 aaKnown RBP10.67□□□□□ -0.7
COPS6-204ENST00000426712 ICA1Q05084 483 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 SHHQ15465 462 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 ZNF792Q3KQV3 632 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 ANO1Q5XXA6 986 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 CTR9Q6PD62 1173 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 NCAPG2Q86XI2 1143 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 SPICE1Q8N0Z3 855 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 REPS2Q8NFH8 660 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
COPS6-204ENST00000426712 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.67□□□□□ -0.7
COPS6-204ENST00000426712 PRKAG2Q9UGJ0 569 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 DDX19BQ9UMR2 479 aa10.67□□□□□ -0.7
COPS6-204ENST00000426712 CYP2D7A0A087X1C5 515 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 TRIM43BA6NCK2 446 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 APBB1O00213 710 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 CHGBP05060 677 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 STAT3P40763 770 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 PLS1Q14651 629 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 TRIM60Q495X7 471 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 SBK1Q52WX2 424 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 TRIM43Q96BQ3 446 aaPredicted RBP10.66□□□□□ -0.7
COPS6-204ENST00000426712 PUS7LQ9H0K6 701 aaKnown RBP10.66□□□□□ -0.7
COPS6-204ENST00000426712 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
COPS6-204ENST00000426712 PPP1R9AQ9ULJ8 1098 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 PHF24Q9UPV7 400 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 ATP11BQ9Y2G3 1177 aa10.66□□□□□ -0.7
COPS6-204ENST00000426712 CDH23Q9H251 3354 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
COPS6-204ENST00000426712 COPB2P35606 906 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 C9orf50Q5SZB4 431 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 GIMAP6Q6P9H5 292 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 MSL3Q8N5Y2 521 aaKnown RBP10.65□□□□□ -0.7
COPS6-204ENST00000426712 BADQ92934 168 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 STRBPQ96SI9 672 aaKnown RBP10.65□□□□□ -0.7
COPS6-204ENST00000426712 MMP19Q99542 508 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 TINF2Q9BSI4 451 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 CHMP4BQ9H444 224 aaKnown RBP10.65□□□□□ -0.7
COPS6-204ENST00000426712 PDLIM7Q9NR12 457 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 FBXO28Q9NVF7 368 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 COG6Q9Y2V7 657 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 TACC3Q9Y6A5 838 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 SLC4A4Q9Y6R1 1079 aa10.65□□□□□ -0.7
COPS6-204ENST00000426712 ROBO3Q96MS0 1386 aa10.65□□□□□ -0.71
COPS6-204ENST00000426712 DNAJC25-GNG10A0A024R161 153 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 GSG1L2A8MUP6 293 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 TAL1P17542 331 aaPredicted RBP10.64□□□□□ -0.71
COPS6-204ENST00000426712 SMAD3P84022 425 aaKnown RBP10.64□□□□□ -0.71
COPS6-204ENST00000426712 TLE2Q04725 743 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 ZSCAN25Q6NSZ9 544 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 MAMDC4Q6UXC1 1216 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
COPS6-204ENST00000426712 AMOTL1Q8IY63 956 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 MKL1Q969V6 931 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 TSEN34Q9BSV6 310 aaKnown RBP10.64□□□□□ -0.71
COPS6-204ENST00000426712 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 XPNPEP3Q9NQH7 507 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 NYAP2Q9P242 653 aa10.64□□□□□ -0.71
COPS6-204ENST00000426712 VCANP13611 3396 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 KIAA0355O15063 1070 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 PGK2P07205 417 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 RARBP10826 455 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 RASA1P20936 1047 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 ITGB8P26012 769 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 KCTD2Q14681 263 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 FAM83BQ5T0W9 1011 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 CCSAPQ6IQ19 270 aaPredicted RBP10.63□□□□□ -0.71
COPS6-204ENST00000426712 ANKRD33Q7Z3H0 272 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 RNF180Q86T96 592 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 PRPF38AQ8NAV1 312 aaKnown RBP10.63□□□□□ -0.71
COPS6-204ENST00000426712 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 TOX2Q96NM4 488 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 CDX2Q99626 313 aaPredicted RBP10.63□□□□□ -0.71
COPS6-204ENST00000426712 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
COPS6-204ENST00000426712 LRRCC1Q9C099 1032 aa10.63□□□□□ -0.71
COPS6-204ENST00000426712 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
COPS6-204ENST00000426712 IGKV6D-41A0A0C4DH26 115 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms