RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 CRB1P82279 1406 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 ZEB2O60315 1214 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 RSPH3Q86UC2 560 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 KIAA0825Q8IV33 1275 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 DNAJC5Q9H3Z4 198 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 PI4KBQ9UBF8 816 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
SP1-202ENST00000426431 KIF11P52732 1056 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 WDR11Q9BZH6 1224 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 RGS12O14924 1447 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 ACTN4O43707 911 aaKnown RBP11.3□□□□□ -0.6
SP1-202ENST00000426431 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 PCDHA12Q9UN75 941 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 ZYXQ15942 572 aaKnown RBP11.3□□□□□ -0.6
SP1-202ENST00000426431 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 USH1GQ495M9 461 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 ANKRD35Q8N283 1001 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 MAP4K1Q92918 833 aa11.3□□□□□ -0.6
SP1-202ENST00000426431 ERCC6L2Q5T890 1561 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 FGAP02671 866 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 STX17P56962 302 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 PIGBQ92521 554 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 FOXP1Q9H334 677 aaPredicted RBP11.29□□□□□ -0.6
SP1-202ENST00000426431 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
SP1-202ENST00000426431 NSMCE1Q8WV22 266 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 ZNF830Q96NB3 372 aaPredicted RBP11.29□□□□□ -0.6
SP1-202ENST00000426431 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
SP1-202ENST00000426431 GCNT3O95395 438 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 ADD2P35612 726 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 FAM169AQ9Y6X4 670 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 IVLP07476 585 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 PTGS1P23219 599 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
SP1-202ENST00000426431 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
SP1-202ENST00000426431 ARID5AQ03989 594 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
SP1-202ENST00000426431 SUGT1Q9Y2Z0 365 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 NCOA3Q9Y6Q9 1424 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 GAP43P17677 238 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 INF2Q27J81 1249 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 IPO4Q8TEX9 1081 aaKnown RBP11.28□□□□□ -0.6
SP1-202ENST00000426431 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 H7C1W4 665 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 SPOPO43791 374 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 PRPF6O94906 941 aaKnown RBP11.28□□□□□ -0.6
SP1-202ENST00000426431 RCAN1P53805 252 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 SEPT2Q15019 361 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 MYOCDQ8IZQ8 938 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 PHKA1P46020 1223 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 CFAP58Q5T655 872 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 ALAS1P13196 640 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 CMA1P23946 247 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
SP1-202ENST00000426431 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
SP1-202ENST00000426431 A0A0D9SFI3 127 aa11.27□□□□□ -0.6
SP1-202ENST00000426431 COPB2P35606 906 aa11.27□□□□□ -0.6
SP1-202ENST00000426431 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.6
SP1-202ENST00000426431 ODR4Q5SWX8 454 aa11.27□□□□□ -0.6
SP1-202ENST00000426431 GADL1Q6ZQY3 521 aa11.27□□□□□ -0.6
SP1-202ENST00000426431 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.6
SP1-202ENST00000426431 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
SP1-202ENST00000426431 FDX1P10109 184 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 PODNQ7Z5L7 613 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 PHKBQ93100 1093 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 RPGRIP1Q96KN7 1286 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.61
SP1-202ENST00000426431 ZNF521Q96K83 1311 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 BRD1O95696 1058 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 TNNC2P02585 160 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
SP1-202ENST00000426431 OTUD6BQ8N6M0 293 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 RGS22Q8NE09 1264 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.61
SP1-202ENST00000426431 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 TCP10L2B9ZVM9 353 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 CALCOCO1Q9P1Z2 691 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 PCDHA1Q9Y5I3 950 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
SP1-202ENST00000426431 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms