RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MKNK2Q9HBH9 465 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 VPS18Q9P253 973 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 WNT7AO00755 349 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 CDC25BP30305 580 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 UBXN1Q04323 297 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 CHD4Q14839 1912 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 TRIM49BA6NDI0 452 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 APBA3O96018 575 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 SERPINB2P05120 415 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 TOB1P50616 345 aaPredicted RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 ARFGAP3Q9NP61 516 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 QSER1Q2KHR3 1735 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 AKR1B15C9JRZ8 316 aaPredicted RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 ABL1P00519 1130 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 PNMA6AP0CW24 399 aaPredicted RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 IDEP14735 1019 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 COL23A1Q86Y22 540 aaPredicted RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 ZNF384Q8TF68 577 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 AGXT2Q9BYV1 514 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 MRPL44Q9H9J2 332 aaKnown RBP15.15■□□□□ 0.02
USP42-203ENST00000426246 TRIM10Q9UDY6 481 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
USP42-203ENST00000426246 MAST2Q6P0Q8 1798 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 CCDC196A0A1B0GTZ2 297 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 MMP1P03956 469 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 RAD51AP2Q09MP3 1159 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 GRAPQ13588 217 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 CAVIN4Q5BKX8 364 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 VSTM4Q8IW00 320 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 ANKRD20A12PQ8NF67 263 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 GRAPLQ8TC17 118 aaPredicted RBP15.14■□□□□ 0.01
USP42-203ENST00000426246 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 IMPACTQ9P2X3 320 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 SALL1Q9NSC2 1324 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 SYNRGQ9UMZ2 1314 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 MACROD2A1Z1Q3 448 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 CCDC175P0C221 793 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 ST5P78524 1137 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 RASGRP2Q7LDG7 609 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 TXNRD3Q86VQ6 643 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 TACC3Q9Y6A5 838 aa15.14■□□□□ 0.01
USP42-203ENST00000426246 TERF2Q15554 542 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 KIAA1328Q86T90 577 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 DYNLL2Q96FJ2 89 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 DEXIO95424 95 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 KRT2P35908 639 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 ARID5AQ03989 594 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 RGS22Q8NE09 1264 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
USP42-203ENST00000426246 FAM217BQ9NTX9 383 aaPredicted RBP15.13■□□□□ 0.01
USP42-203ENST00000426246 DACH1Q9UI36 760 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 ARHGAP6O43182 974 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 SRGAP2O75044 1071 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 KRT9P35527 623 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 RESP18Q5W5W9 173 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
USP42-203ENST00000426246 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
USP42-203ENST00000426246 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
USP42-203ENST00000426246 PTPAQ15257 358 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 NCAPH2Q6IBW4 605 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 CRACR2BQ8N4Y2 399 aaPredicted RBP15.12■□□□□ 0.01
USP42-203ENST00000426246 HPS3Q969F9 1004 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 PARD6BQ9BYG5 372 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 GNL3LQ9NVN8 582 aaKnown RBP15.12■□□□□ 0.01
USP42-203ENST00000426246 PDS5AQ29RF7 1337 aaKnown RBP15.12■□□□□ 0.01
USP42-203ENST00000426246 SLC44A5Q8NCS7 719 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 STAT6P42226 847 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 TTC38Q5R3I4 469 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 ANKRD2Q9GZV1 360 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 PNPLA7Q6ZV29 1317 aa15.12■□□□□ 0.01
USP42-203ENST00000426246 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 CCP110O43303 1012 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 IPO7O95373 1038 aaKnown RBP15.11■□□□□ 0.01
USP42-203ENST00000426246 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
USP42-203ENST00000426246 UBA7P41226 1012 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 SLC35F6Q8N357 371 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 FBXL16Q8N461 479 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 JADE2Q9NQC1 790 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 INTS13Q9NVM9 706 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 CEP131Q9UPN4 1083 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 A0A087X0B3 334 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
USP42-203ENST00000426246 PRDX5P30044 214 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
USP42-203ENST00000426246 CUL4BQ13620 913 aa15.11■□□□□ 0.01
USP42-203ENST00000426246 HSP90B2PQ58FF3 399 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms