RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 PRKAG2Q9UGJ0 569 aa21.18■□□□□ 0.98
HDAC7-208ENST00000425451 MYH8P13535 1937 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 KBTBD13C9JR72 458 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 FCER1AP12319 257 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 EEF2P13639 858 aaKnown RBP21.17■□□□□ 0.98
HDAC7-208ENST00000425451 ADCYAP1R1P41586 468 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 LRRC41Q15345 812 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 UBE3CQ15386 1083 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 FBXO28Q9NVF7 368 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 DDX19BQ9UMR2 479 aa21.17■□□□□ 0.98
HDAC7-208ENST00000425451 SLC25A27O95847 323 aa21.16■□□□□ 0.98
HDAC7-208ENST00000425451 TRIM60Q495X7 471 aa21.16■□□□□ 0.98
HDAC7-208ENST00000425451 FAM47AQ5JRC9 791 aa21.16■□□□□ 0.98
HDAC7-208ENST00000425451 CTR9Q6PD62 1173 aa21.16■□□□□ 0.98
HDAC7-208ENST00000425451 SAMD1Q6SPF0 538 aaPredicted RBP21.16■□□□□ 0.98
HDAC7-208ENST00000425451 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.988e-7■■■□□ 18
HDAC7-208ENST00000425451 SHHQ15465 462 aa21.15■□□□□ 0.98
HDAC7-208ENST00000425451 C1orf53Q5VUE5 145 aa21.15■□□□□ 0.98
HDAC7-208ENST00000425451 RIOX2Q8IUF8 465 aa21.15■□□□□ 0.98
HDAC7-208ENST00000425451 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
HDAC7-208ENST00000425451 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.15■□□□□ 0.98
HDAC7-208ENST00000425451 PUS7LQ9H0K6 701 aaKnown RBP21.15■□□□□ 0.98
HDAC7-208ENST00000425451 KANSL2Q9H9L4 492 aa21.15■□□□□ 0.98
HDAC7-208ENST00000425451 SLC4A4Q9Y6R1 1079 aa21.15■□□□□ 0.98
HDAC7-208ENST00000425451 ZNFX1Q9P2E3 1918 aaKnown RBP21.15■□□□□ 0.98
HDAC7-208ENST00000425451 COL11A1P12107 1806 aaPredicted RBP21.15■□□□□ 0.98
HDAC7-208ENST00000425451 VWA5AO00534 786 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 MYCNP04198 464 aaPredicted RBP21.14■□□□□ 0.97
HDAC7-208ENST00000425451 PGK2P07205 417 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 ZNF792Q3KQV3 632 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 C9orf50Q5SZB4 431 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 SH3RF1Q7Z6J0 888 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 REPS2Q8NFH8 660 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 BADQ92934 168 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 PDLIM7Q9NR12 457 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 NRBP1Q9UHY1 535 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 UNC80Q8N2C7 3258 aa21.14■□□□□ 0.97
HDAC7-208ENST00000425451 TRIM43BA6NCK2 446 aa21.13■□□□□ 0.97
HDAC7-208ENST00000425451 TAL1P17542 331 aaPredicted RBP21.13■□□□□ 0.97
HDAC7-208ENST00000425451 AMOTL1Q8IY63 956 aa21.13■□□□□ 0.97
HDAC7-208ENST00000425451 TRIM43Q96BQ3 446 aaPredicted RBP21.13■□□□□ 0.97
HDAC7-208ENST00000425451 FAM161BQ96MY7 647 aa21.13■□□□□ 0.97
HDAC7-208ENST00000425451 MMP19Q99542 508 aa21.13■□□□□ 0.97
HDAC7-208ENST00000425451 PRDM5Q9NQX1 630 aaPredicted RBP21.13■□□□□ 0.97
HDAC7-208ENST00000425451 ZNF214Q9UL59 606 aaPredicted RBP21.13■□□□□ 0.97
HDAC7-208ENST00000425451 PPP1R9AQ9ULJ8 1098 aa21.13■□□□□ 0.97
HDAC7-208ENST00000425451 PHF24Q9UPV7 400 aa21.13■□□□□ 0.97
HDAC7-208ENST00000425451 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
HDAC7-208ENST00000425451 STAT3P40763 770 aa21.12■□□□□ 0.97
HDAC7-208ENST00000425451 FAM83BQ5T0W9 1011 aa21.12■□□□□ 0.97
HDAC7-208ENST00000425451 TINF2Q9BSI4 451 aa21.12■□□□□ 0.97
HDAC7-208ENST00000425451 XPNPEP3Q9NQH7 507 aa21.12■□□□□ 0.97
HDAC7-208ENST00000425451 DIS3Q9Y2L1 958 aaKnown RBP21.12■□□□□ 0.97
HDAC7-208ENST00000425451 TLE2Q04725 743 aa21.11■□□□□ 0.97
HDAC7-208ENST00000425451 DDRGK1Q96HY6 314 aa21.11■□□□□ 0.97
HDAC7-208ENST00000425451 GOPCQ9HD26 462 aa21.11■□□□□ 0.97
HDAC7-208ENST00000425451 MYH7P12883 1935 aa21.11■□□□□ 0.97
HDAC7-208ENST00000425451 PGK1P00558 417 aa21.1■□□□□ 0.97
HDAC7-208ENST00000425451 ZNF865P0CJ78 1059 aaPredicted RBP21.1■□□□□ 0.97
HDAC7-208ENST00000425451 RARBP10826 455 aa21.1■□□□□ 0.97
HDAC7-208ENST00000425451 ITGB8P26012 769 aa21.1■□□□□ 0.97
HDAC7-208ENST00000425451 KCTD2Q14681 263 aa21.1■□□□□ 0.97
HDAC7-208ENST00000425451 STRBPQ96SI9 672 aaKnown RBP21.1■□□□□ 0.97
HDAC7-208ENST00000425451 GREB1LQ9C091 1923 aaPredicted RBP21.1■□□□□ 0.97
HDAC7-208ENST00000425451 SMARCA5O60264 1052 aaPredicted RBP21.09■□□□□ 0.97
HDAC7-208ENST00000425451 RASA1P20936 1047 aa21.09■□□□□ 0.97
HDAC7-208ENST00000425451 ZNF697Q5TEC3 545 aa21.09■□□□□ 0.97
HDAC7-208ENST00000425451 ZSCAN25Q6NSZ9 544 aa21.09■□□□□ 0.97
HDAC7-208ENST00000425451 NUP88Q99567 741 aaPredicted RBP21.09■□□□□ 0.97
HDAC7-208ENST00000425451 LRRCC1Q9C099 1032 aa21.09■□□□□ 0.97
HDAC7-208ENST00000425451 ARPP21Q9UBL0 812 aaPredicted RBP21.09■□□□□ 0.97
HDAC7-208ENST00000425451 ROBO3Q96MS0 1386 aa21.09■□□□□ 0.97
HDAC7-208ENST00000425451 GSG1L2A8MUP6 293 aa21.08■□□□□ 0.97
HDAC7-208ENST00000425451 RAD21O60216 631 aa21.08■□□□□ 0.97
HDAC7-208ENST00000425451 SBK1Q52WX2 424 aa21.08■□□□□ 0.97
HDAC7-208ENST00000425451 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.08■□□□□ 0.97
HDAC7-208ENST00000425451 PLXNA1Q9UIW2 1896 aa21.08■□□□□ 0.97
HDAC7-208ENST00000425451 ADAMTS4O75173 837 aa21.07■□□□□ 0.96
HDAC7-208ENST00000425451 RNF180Q86T96 592 aa21.07■□□□□ 0.96
HDAC7-208ENST00000425451 LENG1Q96BZ8 264 aaPredicted RBP21.07■□□□□ 0.96
HDAC7-208ENST00000425451 CDX2Q99626 313 aaPredicted RBP21.07■□□□□ 0.96
HDAC7-208ENST00000425451 COL25A1Q9BXS0 654 aaPredicted RBP21.07■□□□□ 0.96
HDAC7-208ENST00000425451 SEMA6BQ9H3T3 888 aa21.07■□□□□ 0.96
HDAC7-208ENST00000425451 CHMP4BQ9H444 224 aaKnown RBP21.07■□□□□ 0.96
HDAC7-208ENST00000425451 RIPK3Q9Y572 518 aa21.07■□□□□ 0.96
HDAC7-208ENST00000425451 TACC3Q9Y6A5 838 aa21.07■□□□□ 0.96
HDAC7-208ENST00000425451 A0A1W2PQ45 241 aaPredicted RBP21.06■□□□□ 0.96
HDAC7-208ENST00000425451 A0A1W2PQY0 241 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 F5H6K3 240 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 AKR1A1P14550 325 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 COPB2P35606 906 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 EPHB4P54760 987 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 SMAD3P84022 425 aaKnown RBP21.06■□□□□ 0.96
HDAC7-208ENST00000425451 KLRC3Q07444 240 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 OSBP2Q969R2 916 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 SLF1Q9BQI6 1058 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 NYAP2Q9P242 653 aa21.06■□□□□ 0.96
HDAC7-208ENST00000425451 DNAJC25-GNG10A0A024R161 153 aa21.05■□□□□ 0.96
HDAC7-208ENST00000425451 SNAI1O95863 264 aaPredicted RBP21.05■□□□□ 0.96
HDAC7-208ENST00000425451 NDUFB10O96000 172 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms