RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ALX1Q15699 326 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 NECAB2Q7Z6G3 386 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 MB21D1Q8N884 522 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 CLIP2Q9UDT6 1046 aa26■■□□□ 1.75
TRAF4-204ENST00000422344 HMGCRP04035 888 aa25.99■■□□□ 1.75
TRAF4-204ENST00000422344 HSPD1P10809 573 aaKnown RBP25.99■■□□□ 1.75
TRAF4-204ENST00000422344 TFAP4Q01664 338 aa25.99■■□□□ 1.75
TRAF4-204ENST00000422344 FAM47AQ5JRC9 791 aa25.99■■□□□ 1.75
TRAF4-204ENST00000422344 ZNF589Q86UQ0 364 aaPredicted RBP25.99■■□□□ 1.75
TRAF4-204ENST00000422344 NEDD1Q8NHV4 660 aa25.99■■□□□ 1.75
TRAF4-204ENST00000422344 CEP95Q96GE4 821 aa25.99■■□□□ 1.75
TRAF4-204ENST00000422344 IVNS1ABPQ9Y6Y0 642 aa25.99■■□□□ 1.75
TRAF4-204ENST00000422344 PLIN4Q96Q06 1357 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 IGKV6D-41A0A0C4DH26 115 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 TTLL1O95922 423 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 PDE4AP27815 886 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 RGS2P41220 211 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 TRIM32Q13049 653 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 FAM83BQ5T0W9 1011 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 CWC27Q6UX04 472 aaKnown RBP25.98■■□□□ 1.75
TRAF4-204ENST00000422344 MTMR4Q9NYA4 1195 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 ANAPC4Q9UJX5 808 aa25.98■■□□□ 1.75
TRAF4-204ENST00000422344 A0A1W2PPC1 479 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 TSPY2A6NKD2 308 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 FGAP02671 866 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 PLS1Q14651 629 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 PPP4R3BQ5MIZ7 849 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 ATG4CQ96DT6 458 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 HMX1Q9NP08 348 aaPredicted RBP25.97■■□□□ 1.75
TRAF4-204ENST00000422344 TOMM22Q9NS69 142 aa25.97■■□□□ 1.75
TRAF4-204ENST00000422344 LAMA3Q16787 3333 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 ZMYM6O95789 1325 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 RPTORQ8N122 1335 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 F5H6K3 240 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 KLRC3Q07444 240 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 TRMT44Q8IYL2 757 aaKnown RBP25.96■■□□□ 1.75
TRAF4-204ENST00000422344 ANKLE1Q8NAG6 615 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 SPATC1LQ9H0A9 340 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 SYNPO2Q9UMS6 1093 aa25.96■■□□□ 1.75
TRAF4-204ENST00000422344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.96■■□□□ 1.75
TRAF4-204ENST00000422344 A0A0G2JMZ2 1700 aa25.95■■□□□ 1.74
TRAF4-204ENST00000422344 RANBP6O60518 1105 aaKnown RBP25.95■■□□□ 1.74
TRAF4-204ENST00000422344 NDUFB10O96000 172 aa25.95■■□□□ 1.74
TRAF4-204ENST00000422344 XRCC5P13010 732 aaKnown RBP25.95■■□□□ 1.74
TRAF4-204ENST00000422344 MORN1Q5T089 497 aa25.95■■□□□ 1.74
TRAF4-204ENST00000422344 TTC22Q5TAA0 569 aa25.95■■□□□ 1.74
TRAF4-204ENST00000422344 APBA2Q99767 749 aa25.95■■□□□ 1.74
TRAF4-204ENST00000422344 MOV10L1Q9BXT6 1211 aaKnown RBP25.95■■□□□ 1.74
TRAF4-204ENST00000422344 PLXNB2O15031 1838 aa25.95■■□□□ 1.74
TRAF4-204ENST00000422344 SLC15A5A6NIM6 579 aa25.94■■□□□ 1.74
TRAF4-204ENST00000422344 SOX1O00570 391 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-204ENST00000422344 ZKSCAN1P17029 563 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-204ENST00000422344 MAP2K5Q13163 448 aa25.94■■□□□ 1.74
TRAF4-204ENST00000422344 C7orf61Q8IZ16 206 aa25.94■■□□□ 1.74
TRAF4-204ENST00000422344 LRRC47Q8N1G4 583 aaKnown RBP25.94■■□□□ 1.74
TRAF4-204ENST00000422344 MKL1Q969V6 931 aa25.94■■□□□ 1.74
TRAF4-204ENST00000422344 NUP88Q99567 741 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-204ENST00000422344 FBXO28Q9NVF7 368 aa25.94■■□□□ 1.74
TRAF4-204ENST00000422344 RLFQ13129 1914 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 MYH4Q9Y623 1939 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 PTPREP23469 700 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 RRP12Q5JTH9 1297 aaKnown RBP25.93■■□□□ 1.74
TRAF4-204ENST00000422344 SHCBP1Q8NEM2 672 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 TRIB2Q92519 343 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 LRCH3Q96II8 777 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 INCENPQ9NQS7 918 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 PPP1R9AQ9ULJ8 1098 aa25.93■■□□□ 1.74
TRAF4-204ENST00000422344 ORC4O43929 436 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 HAND2P61296 217 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 NCAPG2Q86XI2 1143 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 GMCL1P1Q8NEA9 526 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 USP6NLQ92738 828 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 SLF1Q9BQI6 1058 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 NBPF3Q9H094 633 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 MROH8Q9H579 483 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 ISY1Q9ULR0 285 aaKnown RBP25.92■■□□□ 1.74
TRAF4-204ENST00000422344 ZMYND8Q9ULU4 1186 aaPredicted RBP25.92■■□□□ 1.74
TRAF4-204ENST00000422344 STX8Q9UNK0 236 aa25.92■■□□□ 1.74
TRAF4-204ENST00000422344 ERCC3P19447 782 aa25.91■■□□□ 1.74
TRAF4-204ENST00000422344 PARP14Q460N5 1801 aa25.91■■□□□ 1.74
TRAF4-204ENST00000422344 VWA5AO00534 786 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 STRNO43815 780 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 GSPT1P15170 499 aaKnown RBP25.9■■□□□ 1.74
TRAF4-204ENST00000422344 MNX1P50219 401 aaPredicted RBP25.9■■□□□ 1.74
TRAF4-204ENST00000422344 GRB14Q14449 540 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 TMEM132BQ14DG7 1078 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 SLFN13Q68D06 897 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 GDF15Q99988 308 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 ADAMTS5Q9UNA0 930 aa25.9■■□□□ 1.74
TRAF4-204ENST00000422344 CTDP1Q9Y5B0 961 aaPredicted RBP25.9■■□□□ 1.74
TRAF4-204ENST00000422344 COL6A3P12111 3177 aa25.89■■□□□ 1.74
TRAF4-204ENST00000422344 SLC25A27O95847 323 aa25.89■■□□□ 1.74
TRAF4-204ENST00000422344 FGRP09769 529 aa25.89■■□□□ 1.74
TRAF4-204ENST00000422344 MFSD6Q6ZSS7 791 aa25.89■■□□□ 1.74
TRAF4-204ENST00000422344 RNF41Q9H4P4 317 aaPredicted RBP25.89■■□□□ 1.74
TRAF4-204ENST00000422344 C11orf49Q9H6J7 331 aa25.89■■□□□ 1.74
TRAF4-204ENST00000422344 OGDHLQ9ULD0 1010 aa25.89■■□□□ 1.74
TRAF4-204ENST00000422344 ZNF213O14771 459 aa25.88■■□□□ 1.73
TRAF4-204ENST00000422344 PCP11498 1178 aaKnown RBP25.88■■□□□ 1.73
TRAF4-204ENST00000422344 BMP3P12645 472 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms