RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 RAD21O60216 631 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 COBLO75128 1261 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 SLC25A27O95847 323 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 TMEM132BQ14DG7 1078 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 TSHZ3Q63HK5 1081 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 GIMAP6Q6P9H5 292 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 LRCH3Q96II8 777 aa20.71■□□□□ 0.91
PTCD1-202ENST00000419981 SENP6Q9GZR1 1112 aaPredicted RBP20.71■□□□□ 0.91
PTCD1-202ENST00000419981 GSG1L2A8MUP6 293 aa20.7■□□□□ 0.9
PTCD1-202ENST00000419981 DNM1LO00429 736 aa20.7■□□□□ 0.9
PTCD1-202ENST00000419981 ZFYP08048 801 aaPredicted RBP20.7■□□□□ 0.9
PTCD1-202ENST00000419981 FCER1AP12319 257 aa20.7■□□□□ 0.9
PTCD1-202ENST00000419981 OSBP2Q969R2 916 aa20.7■□□□□ 0.9
PTCD1-202ENST00000419981 FBXO28Q9NVF7 368 aa20.7■□□□□ 0.9
PTCD1-202ENST00000419981 ADAMTS5Q9UNA0 930 aa20.7■□□□□ 0.9
PTCD1-202ENST00000419981 MINDY4BA8MYZ0 360 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 RNF113AO15541 343 aaKnown RBP20.69■□□□□ 0.9
PTCD1-202ENST00000419981 RASA1P20936 1047 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 FAM83BQ5T0W9 1011 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 TDHQ8IZJ6 230 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 STK11IPQ8N1F8 1099 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 UBE2OQ9C0C9 1292 aaKnown RBP20.69■□□□□ 0.9
PTCD1-202ENST00000419981 MKNK2Q9HBH9 465 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 PPP1R9AQ9ULJ8 1098 aa20.69■□□□□ 0.9
PTCD1-202ENST00000419981 SEPT4O43236 478 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 GPAA1O43292 621 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 GNAT2P19087 354 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 RIOX2Q8IUF8 465 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 ARRDC4Q8NCT1 418 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 MAML3Q96JK9 1138 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 MMP19Q99542 508 aa20.68■□□□□ 0.9
PTCD1-202ENST00000419981 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.68■□□□□ 0.9
PTCD1-202ENST00000419981 KBTBD13C9JR72 458 aa20.67■□□□□ 0.9
PTCD1-202ENST00000419981 VWA5AO00534 786 aa20.67■□□□□ 0.9
PTCD1-202ENST00000419981 TDO2P48775 406 aa20.67■□□□□ 0.9
PTCD1-202ENST00000419981 LRRFIP1Q32MZ4 808 aaKnown RBP20.67■□□□□ 0.9
PTCD1-202ENST00000419981 GJC2Q5T442 439 aaPredicted RBP20.67■□□□□ 0.9
PTCD1-202ENST00000419981 ANO1Q5XXA6 986 aa20.67■□□□□ 0.9
PTCD1-202ENST00000419981 TTC41PQ6P2S7 1318 aa20.67■□□□□ 0.9
PTCD1-202ENST00000419981 M0R2C6 588 aa20.66■□□□□ 0.9
PTCD1-202ENST00000419981 COPB2P35606 906 aa20.66■□□□□ 0.9
PTCD1-202ENST00000419981 ATN1P54259 1190 aaPredicted RBP20.66■□□□□ 0.9
PTCD1-202ENST00000419981 EPB41L4AQ9HCS5 686 aaPredicted RBP20.66■□□□□ 0.9
PTCD1-202ENST00000419981 NYAP2Q9P242 653 aa20.66■□□□□ 0.9
PTCD1-202ENST00000419981 ERC2O15083 957 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 APPP05067 770 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 STAT3P40763 770 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 MDM2Q00987 491 aaPredicted RBP20.65■□□□□ 0.9
PTCD1-202ENST00000419981 KCTD2Q14681 263 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 LRIT3Q3SXY7 679 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 PRAMEF19Q5SWL8 479 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 REPS2Q8NFH8 660 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 ZNF287Q9HBT7 754 aa20.65■□□□□ 0.9
PTCD1-202ENST00000419981 ZNF214Q9UL59 606 aaPredicted RBP20.65■□□□□ 0.9
PTCD1-202ENST00000419981 LAMA3Q16787 3333 aa20.64■□□□□ 0.89
PTCD1-202ENST00000419981 RTP1P59025 263 aa20.64■□□□□ 0.89
PTCD1-202ENST00000419981 GPR153Q6NV75 609 aa20.64■□□□□ 0.89
PTCD1-202ENST00000419981 NUP88Q99567 741 aaPredicted RBP20.64■□□□□ 0.89
PTCD1-202ENST00000419981 SLF1Q9BQI6 1058 aa20.64■□□□□ 0.89
PTCD1-202ENST00000419981 F5H6K3 240 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 NDUFB10O96000 172 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 MYCNP04198 464 aaPredicted RBP20.63■□□□□ 0.89
PTCD1-202ENST00000419981 PGK2P07205 417 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 KLRC3Q07444 240 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 ZNF444Q8N0Y2 327 aaPredicted RBP20.63■□□□□ 0.89
PTCD1-202ENST00000419981 LBHD1Q9BQE6 289 aaPredicted RBP20.63■□□□□ 0.89
PTCD1-202ENST00000419981 CLIP2Q9UDT6 1046 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 PRKAG2Q9UGJ0 569 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 NRBP1Q9UHY1 535 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 DIS3Q9Y2L1 958 aaKnown RBP20.63■□□□□ 0.89
PTCD1-202ENST00000419981 PCDHB15Q9Y5E8 787 aa20.63■□□□□ 0.89
PTCD1-202ENST00000419981 IGKV6D-41A0A0C4DH26 115 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
PTCD1-202ENST00000419981 PRDM1O75626 825 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 ZNF792Q3KQV3 632 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 FAM47AQ5JRC9 791 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 IFNL3Q8IZI9 196 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 PI4K2BQ8TCG2 481 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 TINF2Q9BSI4 451 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 FSD1Q9BTV5 496 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 TEX13BQ9BXU2 312 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 NACAP1Q9BZK3 213 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 ATP11BQ9Y2G3 1177 aa20.62■□□□□ 0.89
PTCD1-202ENST00000419981 PLIN4Q96Q06 1357 aa20.61■□□□□ 0.89
PTCD1-202ENST00000419981 LRRC41Q15345 812 aa20.61■□□□□ 0.89
PTCD1-202ENST00000419981 SNRNP48Q6IEG0 339 aaKnown RBP20.61■□□□□ 0.89
PTCD1-202ENST00000419981 SLC39A5Q6ZMH5 540 aa20.61■□□□□ 0.89
PTCD1-202ENST00000419981 PRPF38AQ8NAV1 312 aaKnown RBP20.61■□□□□ 0.89
PTCD1-202ENST00000419981 CEP95Q96GE4 821 aa20.61■□□□□ 0.89
PTCD1-202ENST00000419981 RARBP10826 455 aa20.6■□□□□ 0.89
PTCD1-202ENST00000419981 PDE4BQ07343 736 aa20.6■□□□□ 0.89
PTCD1-202ENST00000419981 OTUD7AQ8TE49 926 aaPredicted RBP20.6■□□□□ 0.89
PTCD1-202ENST00000419981 SEC62Q99442 399 aaKnown RBP20.6■□□□□ 0.89
PTCD1-202ENST00000419981 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
PTCD1-202ENST00000419981 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
PTCD1-202ENST00000419981 LRRC37A2A6NM11 1700 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 LCTP09848 1927 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 TTLL1O95922 423 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 SLC3A2P08195 630 aaKnown RBP20.59■□□□□ 0.89
PTCD1-202ENST00000419981 MX1P20591 662 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms