RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 CHD7Q9P2D1 2997 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 REV3LO60673 3130 aa12.9□□□□□ -0.34
RAPGEF1-205ENST00000419442 ELP1O95163 1332 aa12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 TLL1O43897 1013 aa12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 DIS3Q9Y2L1 958 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-205ENST00000419442 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 ACRP10323 421 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 FCER1AP12319 257 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 DSG3P32926 999 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 ABCB5Q2M3G0 1257 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 MTIF3Q9H2K0 278 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 COG5Q9UP83 839 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
RAPGEF1-205ENST00000419442 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 SHMT1P34896 483 aa12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 NCAPG2Q86XI2 1143 aa12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 FAM126BQ8IXS8 530 aa12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 LENG1Q96BZ8 264 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 NEUROD6Q96NK8 337 aa12.87□□□□□ -0.35
RAPGEF1-205ENST00000419442 SLC25A27O95847 323 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 CD4P01730 458 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 MTX1Q13505 466 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 KCNA10Q16322 511 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 GORABQ5T7V8 394 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 GLT1D1Q96MS3 346 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 CABP5Q9NP86 173 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
RAPGEF1-205ENST00000419442 TRANK1O15050 2925 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 NAV1Q8NEY1 1877 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 MYADML2A6NDP7 307 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 FAM86C2PA6NEL3 165 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 ARVCFO00192 962 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 FGBP02675 491 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 MRE11P49959 708 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 SEPT2Q15019 361 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 TTC6Q86TZ1 520 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 MICALL1Q8N3F8 863 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 ATG4CQ96DT6 458 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 PPP1R12CQ9BZL4 782 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 TANGO6Q9C0B7 1094 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 MYH8P13535 1937 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 MCM3APO60318 1980 aa12.85□□□□□ -0.35
RAPGEF1-205ENST00000419442 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 CYP2E1P05181 493 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 PGK2P07205 417 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 CYP2C18P33260 490 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 GABPAQ06546 454 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 PLS1Q14651 629 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 RIOX2Q8IUF8 465 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 MMP19Q99542 508 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 UPF3AQ9H1J1 476 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 FAM184BQ9ULE4 1060 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
RAPGEF1-205ENST00000419442 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 TLR3O15455 904 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 ASGR1P07306 291 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 RABGGTBP53611 331 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 NKX3-2P78367 333 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 SKIV2LQ15477 1246 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 PCSK9Q8NBP7 692 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 MEIS3Q99687 375 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 CD320Q9NPF0 282 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-205ENST00000419442 APBB1O00213 710 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 SRGAP3O43295 1099 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 FLOT1O75955 427 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 SNAI1O95863 264 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 MYOGP15173 224 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 PLCD1P51178 756 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 GJA9P57773 515 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms