RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TSGA10IPQ3SY00 556 aa21.97■■□□□ 1.11
PTCD3-204ENST00000418628 RASGRP2Q7LDG7 609 aa21.97■■□□□ 1.11
PTCD3-204ENST00000418628 IQCA1Q86XH1 822 aa21.97■■□□□ 1.11
PTCD3-204ENST00000418628 ENAHQ8N8S7 591 aaPredicted RBP21.97■■□□□ 1.11
PTCD3-204ENST00000418628 TRIM47Q96LD4 638 aa21.97■■□□□ 1.11
PTCD3-204ENST00000418628 NUP88Q99567 741 aaPredicted RBP21.97■■□□□ 1.11
PTCD3-204ENST00000418628 RABGAP1Q9Y3P9 1069 aa21.97■■□□□ 1.11
PTCD3-204ENST00000418628 TNKSO95271 1327 aa21.97■■□□□ 1.11
PTCD3-204ENST00000418628 PEX10O60683 326 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 FLOT1O75955 427 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 SNHG28P0DPA3 235 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 ANTXR2P58335 489 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 ERVK-9P63128 1117 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 ERVK-24P63145 666 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 COL9A3Q14050 684 aaPredicted RBP21.96■■□□□ 1.11
PTCD3-204ENST00000418628 CCDC178Q5BJE1 867 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 SLFN13Q68D06 897 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 NCOA7Q8NI08 942 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 ZSCAN10Q96SZ4 725 aaPredicted RBP21.96■■□□□ 1.11
PTCD3-204ENST00000418628 ZKSCAN3Q9BRR0 538 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 FBXO28Q9NVF7 368 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 PPP1R9AQ9ULJ8 1098 aa21.96■■□□□ 1.11
PTCD3-204ENST00000418628 REC8O95072 547 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 GNRH1P01148 92 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 REPS2Q8NFH8 660 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 ATG4CQ96DT6 458 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 HOXC10Q9NYD6 342 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 BTBD7Q9P203 1132 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 CENPFP49454 3210 aa21.95■■□□□ 1.1
PTCD3-204ENST00000418628 PLA2G6O60733 806 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 TRDNQ13061 729 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 PKN2Q16513 984 aaKnown RBP21.94■■□□□ 1.1
PTCD3-204ENST00000418628 Q3C1V9 767 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 RASEFQ8IZ41 740 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 MB21D1Q8N884 522 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 DCAF4Q8WV16 495 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 MCOLN1Q9GZU1 580 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 EFCC1Q9HA90 598 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 FRMPD3Q5JV73 1810 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 MCM3APO60318 1980 aa21.94■■□□□ 1.1
PTCD3-204ENST00000418628 PDHBP11177 359 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 BMP3P12645 472 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 HSPA4P34932 840 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 PSMC4P43686 418 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 GPRC5AQ8NFJ5 357 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 SLF1Q9BQI6 1058 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 MTA3Q9BTC8 594 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 TRIM17Q9Y577 477 aa21.93■■□□□ 1.1
PTCD3-204ENST00000418628 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
PTCD3-204ENST00000418628 KIF22Q14807 665 aa21.92■■□□□ 1.1
PTCD3-204ENST00000418628 RNF20Q5VTR2 975 aa21.92■■□□□ 1.1
PTCD3-204ENST00000418628 RALYLQ86SE5 291 aaKnown RBP21.92■■□□□ 1.1
PTCD3-204ENST00000418628 UBAC1Q9BSL1 405 aa21.92■■□□□ 1.1
PTCD3-204ENST00000418628 PAGR1Q9BTK6 254 aa21.92■■□□□ 1.1
PTCD3-204ENST00000418628 FEM1BQ9UK73 627 aa21.92■■□□□ 1.1
PTCD3-204ENST00000418628 VWA5AO00534 786 aa21.91■■□□□ 1.1
PTCD3-204ENST00000418628 MCCP23508 829 aa21.91■■□□□ 1.1
PTCD3-204ENST00000418628 SLC1A4P43007 532 aa21.91■■□□□ 1.1
PTCD3-204ENST00000418628 FCGRTP55899 365 aa21.91■■□□□ 1.1
PTCD3-204ENST00000418628 FBXO46Q6PJ61 603 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-204ENST00000418628 PORCNQ9H237 461 aa21.91■■□□□ 1.1
PTCD3-204ENST00000418628 ZNF214Q9UL59 606 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-204ENST00000418628 PTPN22Q9Y2R2 807 aa21.91■■□□□ 1.1
PTCD3-204ENST00000418628 RAD21O60216 631 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 STAT2P52630 851 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 PRMT2P55345 433 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 ARHGEF6Q15052 776 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 BTNL9Q6UXG8 535 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 PRPF38AQ8NAV1 312 aaKnown RBP21.9■■□□□ 1.1
PTCD3-204ENST00000418628 PNMA1Q8ND90 353 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 IGDCC4Q8TDY8 1250 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 SRRDQ9UH36 339 aa21.9■■□□□ 1.1
PTCD3-204ENST00000418628 WDR19Q8NEZ3 1342 aa21.89■■□□□ 1.1
PTCD3-204ENST00000418628 ATP2A1O14983 1001 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 ZNF543Q08ER8 600 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 TMEM132BQ14DG7 1078 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 ADCK5Q3MIX3 580 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 KCTD1Q719H9 257 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 FAM160B2Q86V87 743 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 SHCBP1Q8NEM2 672 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 USP26Q9BXU7 913 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 SPATC1LQ9H0A9 340 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 SLC38A10Q9HBR0 1119 aa21.89■■□□□ 1.09
PTCD3-204ENST00000418628 TMEM232C9JQI7 657 aa21.88■■□□□ 1.09
PTCD3-204ENST00000418628 MAPK4P31152 587 aa21.88■■□□□ 1.09
PTCD3-204ENST00000418628 IFIT1BQ5T764 474 aaKnown RBP21.88■■□□□ 1.09
PTCD3-204ENST00000418628 MOV10L1Q9BXT6 1211 aaKnown RBP21.88■■□□□ 1.09
PTCD3-204ENST00000418628 SENP2Q9HC62 589 aa21.88■■□□□ 1.09
PTCD3-204ENST00000418628 GJD2Q9UKL4 321 aa21.88■■□□□ 1.09
PTCD3-204ENST00000418628 LRRC37A2A6NM11 1700 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 TNPO2O14787 897 aaKnown RBP21.87■■□□□ 1.09
PTCD3-204ENST00000418628 FMNL1O95466 1100 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-204ENST00000418628 MCM5P33992 734 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 CCNA1P78396 465 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 PRKCZQ05513 592 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 KRT32Q14532 448 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 CHST3Q7LGC8 479 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 TNS4Q8IZW8 715 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 KAT14Q9H8E8 782 aa21.87■■□□□ 1.09
PTCD3-204ENST00000418628 LY9Q9HBG7 655 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms