RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 INCENPQ9NQS7 918 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 ANAPC4Q9UJX5 808 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 NEDD4P46934 1319 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 WDR19Q8NEZ3 1342 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 DOCK3Q8IZD9 2030 aa15.41■□□□□ 0.06
HLA-DMB-258ENST00000418107 COL6A3P12111 3177 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 ERICH2A1L162 156 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 IFIT3O14879 490 aaKnown RBP15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 CAPN2P17655 700 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 PDE4BQ07343 736 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 SBK1Q52WX2 424 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 NFXL1Q6ZNB6 911 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 CYB5R4Q7L1T6 521 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 PROCA1Q8NCQ7 364 aaPredicted RBP15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 CHMP4CQ96CF2 233 aa15.4■□□□□ 0.06
HLA-DMB-258ENST00000418107 HMGCS2P54868 508 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 ANTXR2P58335 489 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 RRP1BQ14684 758 aaKnown RBP15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 TMEM67Q5HYA8 995 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 NECAB2Q7Z6G3 386 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZNF280CQ8ND82 737 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 SLC17A8Q8NDX2 589 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 ESR2Q92731 530 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 TMEM87BQ96K49 555 aa15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 OSBPL5Q9H0X9 879 aaPredicted RBP15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 SAP30BPQ9UHR5 308 aaKnown RBP15.39■□□□□ 0.05
HLA-DMB-258ENST00000418107 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 RANBP6O60518 1105 aaKnown RBP15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 HMGCRP04035 888 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 CYP2D6P10635 497 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 PCP11498 1178 aaKnown RBP15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 DDIT3P35638 169 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 GCLCP48506 637 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 TRIM32Q13049 653 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZNF274Q96GC6 653 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 UBAC1Q9BSL1 405 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 ASCC2Q9H1I8 757 aaPredicted RBP15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 LOC285556D6RIA3 1793 aa15.38■□□□□ 0.05
HLA-DMB-258ENST00000418107 KLF18A0A0U1RQI7 1052 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 PFKFB2O60825 505 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 CAP2P40123 477 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 NBR1Q14596 966 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 SYNE3Q6ZMZ3 975 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 FBXL16Q8N461 479 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 GTF3C6Q969F1 213 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 AGXT2Q9BYV1 514 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 GPHNQ9NQX3 736 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZMYND8Q9ULU4 1186 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 FLT1P17948 1338 aa15.37■□□□□ 0.05
HLA-DMB-258ENST00000418107 CCDC69A6NI79 296 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 USP17L5A8MUK1 530 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 DLL1O00548 723 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 SH2B2O14492 632 aaPredicted RBP15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 PRDM1O75626 825 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 GJB2P29033 226 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 GDF15Q99988 308 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 HMX1Q9NP08 348 aaPredicted RBP15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 TACC3Q9Y6A5 838 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 RPTORQ8N122 1335 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 PDIA3P30101 505 aaKnown RBP15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 WTAPQ15007 396 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 RAB3GAP1Q15042 981 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZKSCAN3Q9BRR0 538 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZNF287Q9HBT7 754 aa15.36■□□□□ 0.05
HLA-DMB-258ENST00000418107 A0A0C4DFX4 3053 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 ATAD5Q96QE3 1844 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 SMIM22K7EJ46 135 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 ORC4O43929 436 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 DHX16O60231 1041 aaKnown RBP15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 PEX10O60683 326 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 SYN1P17600 705 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 MTMR2Q13614 643 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 SH3D19Q5HYK7 790 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 IQCA1Q86XH1 822 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 TMTC2Q8N394 836 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 IGDCC4Q8TDY8 1250 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 TRIB2Q92519 343 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 MORF4L1Q9UBU8 362 aa15.35■□□□□ 0.05
HLA-DMB-258ENST00000418107 MYH8P13535 1937 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms