RNA–Protein interactions for RNA: ENST00000417250.1

SNRPCP9-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 9, humanhuman

BASIC

Gene SNRPCP9, Length 207 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP9-201ENST00000417250 FOCADQ5VW36 1801 aa13.04□□□□□ -0.32
SNRPCP9-201ENST00000417250 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 SLC25A27O95847 323 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 PGK2P07205 417 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 STAT3P40763 770 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 LRRC41Q15345 812 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 SHHQ15465 462 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
SNRPCP9-201ENST00000417250 KBTBD13C9JR72 458 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 VWA5AO00534 786 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 RAD21O60216 631 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 C20orf194Q5TEA3 1177 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 SH3RF1Q7Z6J0 888 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 RIOX2Q8IUF8 465 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 AMOTL1Q8IY63 956 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 BADQ92934 168 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 FAM161BQ96MY7 647 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 MMP19Q99542 508 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.33
SNRPCP9-201ENST00000417250 TRIM43BA6NCK2 446 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 GSG1L2A8MUP6 293 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 TLE2Q04725 743 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 TRIM60Q495X7 471 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 FAM109BQ6ICB4 259 aaPredicted RBP13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 TRIM43Q96BQ3 446 aaPredicted RBP13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 TINF2Q9BSI4 451 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
SNRPCP9-201ENST00000417250 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 F5H6K3 240 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 PGK1P00558 417 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 KLRC3Q07444 240 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 KCTD2Q14681 263 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 SBK1Q52WX2 424 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 REPS2Q8NFH8 660 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 OSBP2Q969R2 916 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
SNRPCP9-201ENST00000417250 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 GOPCQ9HD26 462 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 PRDM5Q9NQX1 630 aaPredicted RBP13□□□□□ -0.33
SNRPCP9-201ENST00000417250 CLIP2Q9UDT6 1046 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
SNRPCP9-201ENST00000417250 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
SNRPCP9-201ENST00000417250 RIPK3Q9Y572 518 aa13□□□□□ -0.33
SNRPCP9-201ENST00000417250 ZNF865P0CJ78 1059 aaPredicted RBP12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 RASA1P20936 1047 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 ITGB8P26012 769 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 SNX17Q15036 470 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 GUCD1Q96NT3 240 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 XPNPEP3Q9NQH7 507 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 ECHDC1Q9NTX5 307 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 NYAP2Q9P242 653 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 NRBP1Q9UHY1 535 aa12.99□□□□□ -0.33
SNRPCP9-201ENST00000417250 RARBP10826 455 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 PHF24Q9UPV7 400 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
SNRPCP9-201ENST00000417250 SMCHD1A6NHR9 2005 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 RNF113AO15541 343 aaKnown RBP12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 RNF180Q86T96 592 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 CPXCR1Q8N123 301 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 MKL1Q969V6 931 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 RLFQ13129 1914 aa12.97□□□□□ -0.33
SNRPCP9-201ENST00000417250 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 ZBED4O75132 1171 aa12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 PRDM1O75626 825 aa12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 NDUFB10O96000 172 aa12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 APPP05067 770 aa12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 EPHB4P54760 987 aa12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 SNRNP48Q6IEG0 339 aaKnown RBP12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
SNRPCP9-201ENST00000417250 FAM184BQ9ULE4 1060 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms