RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ADAMTS5Q9UNA0 930 aa17.29■□□□□ 0.36
PAF1-202ENST00000416728 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 MDM2Q00987 491 aaPredicted RBP17.28■□□□□ 0.36
PAF1-202ENST00000416728 SBK1Q52WX2 424 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 FAM83BQ5T0W9 1011 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 GJC2Q5T442 439 aaPredicted RBP17.28■□□□□ 0.36
PAF1-202ENST00000416728 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 GPR153Q6NV75 609 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 MAML3Q96JK9 1138 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 PPP1R9AQ9ULJ8 1098 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 BAZ2AQ9UIF9 1905 aaKnown RBP17.28■□□□□ 0.36
PAF1-202ENST00000416728 RLFQ13129 1914 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 MINDY4BA8MYZ0 360 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 VWA5AO00534 786 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
PAF1-202ENST00000416728 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
PAF1-202ENST00000416728 RASA1P20936 1047 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 KCTD2Q14681 263 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 RIOX2Q8IUF8 465 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 STK11IPQ8N1F8 1099 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 MMP19Q99542 508 aa17.28■□□□□ 0.36
PAF1-202ENST00000416728 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
PAF1-202ENST00000416728 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.28■□□□□ 0.36
PAF1-202ENST00000416728 GPAA1O43292 621 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.35
PAF1-202ENST00000416728 COPB2P35606 906 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 STAT3P40763 770 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 RTP1P59025 263 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 PRAMEF19Q5SWL8 479 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 PRKAG2Q9UGJ0 569 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 ROBO3Q96MS0 1386 aa17.27■□□□□ 0.35
PAF1-202ENST00000416728 MYH8P13535 1937 aa17.26■□□□□ 0.35
PAF1-202ENST00000416728 GNAT2P19087 354 aa17.26■□□□□ 0.35
PAF1-202ENST00000416728 TDO2P48775 406 aa17.26■□□□□ 0.35
PAF1-202ENST00000416728 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
PAF1-202ENST00000416728 NYAP2Q9P242 653 aa17.26■□□□□ 0.35
PAF1-202ENST00000416728 ZNF214Q9UL59 606 aaPredicted RBP17.26■□□□□ 0.35
PAF1-202ENST00000416728 FRMPD3Q5JV73 1810 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 APPP05067 770 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 PGK2P07205 417 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 FAM47AQ5JRC9 791 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 DEFB123Q8N688 67 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
PAF1-202ENST00000416728 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 ZNF287Q9HBT7 754 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
PAF1-202ENST00000416728 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 ATP11BQ9Y2G3 1177 aa17.25■□□□□ 0.35
PAF1-202ENST00000416728 DIS3Q9Y2L1 958 aaKnown RBP17.25■□□□□ 0.35
PAF1-202ENST00000416728 MYH7P12883 1935 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 F5H6K3 240 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 NDUFB10O96000 172 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 KLRC3Q07444 240 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 SLC39A5Q6ZMH5 540 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
PAF1-202ENST00000416728 REPS2Q8NFH8 660 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 TINF2Q9BSI4 451 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 TEX13BQ9BXU2 312 aa17.24■□□□□ 0.35
PAF1-202ENST00000416728 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 M0R2C6 588 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 ERC2O15083 957 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 RARBP10826 455 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 LRRC41Q15345 812 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 Q7L0L9 218 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
PAF1-202ENST00000416728 PRDM1O75626 825 aa17.22■□□□□ 0.35
PAF1-202ENST00000416728 ADCYAP1R1P41586 468 aa17.22■□□□□ 0.35
PAF1-202ENST00000416728 SNRNP48Q6IEG0 339 aaKnown RBP17.22■□□□□ 0.35
PAF1-202ENST00000416728 PRPF38AQ8NAV1 312 aaKnown RBP17.22■□□□□ 0.35
PAF1-202ENST00000416728 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
PAF1-202ENST00000416728 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
PAF1-202ENST00000416728 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
PAF1-202ENST00000416728 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
PAF1-202ENST00000416728 IGKV6D-41A0A0C4DH26 115 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
PAF1-202ENST00000416728 SNX17Q15036 470 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 CEP95Q96GE4 821 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 PRDM5Q9NQX1 630 aaPredicted RBP17.21■□□□□ 0.35
PAF1-202ENST00000416728 CNPY2Q9Y2B0 182 aa17.21■□□□□ 0.35
PAF1-202ENST00000416728 ZBED4O75132 1171 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 AKR1A1P14550 325 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 RNF180Q86T96 592 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 FSD1Q9BTV5 496 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 MTMR4Q9NYA4 1195 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 PARP14Q460N5 1801 aa17.2■□□□□ 0.34
PAF1-202ENST00000416728 ATP2A1O14983 1001 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 TTLL1O95922 423 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms