RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PAIP2Q9BPZ3 127 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ZBED2Q9BTP6 218 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 MRPL4Q9BYD3 311 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 LMAN2LQ9H0V9 348 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 TNKS2Q9H2K2 1166 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 DHX36Q9H2U1 1008 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 AGO4Q9HCK5 861 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ALG13Q9NP73 1137 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PDRG1Q9NUG6 133 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 EVA1BQ9NVM1 165 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 RRN3Q9NYV6 651 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 DACH1Q9UI36 760 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 GJD2Q9UKL4 321 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PPP1R9AQ9ULJ8 1098 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 RABL2BQ9UNT1 228 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 APOBEC2Q9Y235 224 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 TMEM98Q9Y2Y6 226 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PCDHGB3Q9Y5G1 929 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC12A7Q9Y666 1083 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 C3orf80F5H4A9 247 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 NCAM2O15394 837 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 HTATSF1O43719 755 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 KIF5CO60282 957 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 COBLO75128 1261 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 TIPRLO75663 272 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 GFPT2O94808 682 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 MAP3K6O95382 1288 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 LTFP02788 710 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 GLULP15104 373 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 DESP17661 470 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 POU3F2P20265 443 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 COL9A1P20849 921 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 LPOP22079 712 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 GARTP22102 1010 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 PTPREP23469 700 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ELF1P32519 619 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 CHKAP35790 457 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 CRKP46108 304 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 PAPOLAP51003 745 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ALDH5A1P51649 535 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 COPAP53621 1224 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 EPHA4P54764 986 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 MPP1Q00013 466 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 NCAPHQ15003 741 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 TERF2Q15554 542 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 MAP3K11Q16584 847 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ATP13A4Q4VNC1 1196 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ESCO1Q5FWF5 840 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 MORN1Q5T089 497 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 TLDC1Q6P9B6 456 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 OTUD6AQ7L8S5 288 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 CATSPER4Q7RTX7 472 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 WAPLQ7Z5K2 1190 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 NLRP8Q86W28 1048 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ETFBKMTQ8IXQ9 262 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 SLFN12Q8IYM2 578 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 HVCN1Q96D96 273 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 LTV1Q96GA3 475 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 STAC3Q96MF2 364 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 LRRC3Q9BY71 257 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ABCG4Q9H172 646 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 GGNBP2Q9H3C7 697 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 SUV39H2Q9H5I1 410 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM204AQ9H8W3 233 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 PLEKHA5Q9HAU0 1116 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ZFYVE1Q9HBF4 777 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 CYP4F11Q9HBI6 524 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ZCCHC17Q9NP64 241 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 NPHS2Q9NP85 383 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 NMRK2Q9NPI5 230 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 TOPORSQ9NS56 1045 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 DCAF16Q9NXF7 216 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 CPSF2Q9P2I0 782 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ZBTB21Q9ULJ3 1066 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 ZNRF3Q9ULT6 936 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 PA2G4Q9UQ80 394 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 FNDC3AQ9Y2H6 1198 aaKnown RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC27A5Q9Y2P5 690 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 SALL2Q9Y467 1007 aaPredicted RBP3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 MRFAP1Q9Y605 127 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 GPRASP1Q5JY77 1395 aa3.63□□□□□ -1.83
CTDSPL-203ENST00000416688 MAGEB6P1A0A0J9YX57 407 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 SYNDIG1LA6NDD5 238 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 TSPY2A6NKD2 308 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 FOXN3O00409 490 aaPredicted RBP3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 MPHOSPH10O00566 681 aaKnown RBP3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 ADCY3O60266 1144 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 CTNND1O60716 968 aaKnown RBP3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 PHACTR2O75167 634 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 CPP00450 1065 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 CFBP00751 764 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 INHAP05111 366 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 ASGR2P07307 311 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 TSPY3P0CV98 308 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 TSPY8P0CW00 308 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 ATP6V1B1P15313 513 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 RHCEP18577 417 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 GALNSP34059 522 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 ECE1P42892 770 aa3.62□□□□□ -1.83
CTDSPL-203ENST00000416688 LIG3P49916 1009 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms