RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 LRCH3Q96II8 777 aa16■□□□□ 0.15
LINC01398-201ENST00000416581 MMP19Q99542 508 aa16■□□□□ 0.15
LINC01398-201ENST00000416581 BCL11AQ9H165 835 aa16■□□□□ 0.15
LINC01398-201ENST00000416581 ADAMTS5Q9UNA0 930 aa16■□□□□ 0.15
LINC01398-201ENST00000416581 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
LINC01398-201ENST00000416581 RANBP2P49792 3224 aaKnown RBP15.99■□□□□ 0.15
LINC01398-201ENST00000416581 C1orf53Q5VUE5 145 aa15.99■□□□□ 0.15
LINC01398-201ENST00000416581 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
LINC01398-201ENST00000416581 MAML3Q96JK9 1138 aa15.99■□□□□ 0.15
LINC01398-201ENST00000416581 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
LINC01398-201ENST00000416581 PPP1R9AQ9ULJ8 1098 aa15.99■□□□□ 0.15
LINC01398-201ENST00000416581 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
LINC01398-201ENST00000416581 RARBP10826 455 aa15.98■□□□□ 0.15
LINC01398-201ENST00000416581 PPP4R3BQ5MIZ7 849 aa15.98■□□□□ 0.15
LINC01398-201ENST00000416581 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
LINC01398-201ENST00000416581 TEX13BQ9BXU2 312 aa15.98■□□□□ 0.15
LINC01398-201ENST00000416581 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
LINC01398-201ENST00000416581 STXBP5LQ9Y2K9 1186 aa15.98■□□□□ 0.15
LINC01398-201ENST00000416581 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 VWA5AO00534 786 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 ERC2O15083 957 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 COBLO75128 1261 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 STAT3P40763 770 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 RTP1P59025 263 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 EVX2Q03828 476 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 TMEM132BQ14DG7 1078 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 SNX17Q15036 470 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 FAM109BQ6ICB4 259 aaPredicted RBP15.97■□□□□ 0.15
LINC01398-201ENST00000416581 RNF180Q86T96 592 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 SIAH1Q8IUQ4 282 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 DEFB123Q8N688 67 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 TRPV1Q8NER1 839 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 STRBPQ96SI9 672 aaKnown RBP15.97■□□□□ 0.15
LINC01398-201ENST00000416581 NACAP1Q9BZK3 213 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 PUS7LQ9H0K6 701 aaKnown RBP15.97■□□□□ 0.15
LINC01398-201ENST00000416581 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
LINC01398-201ENST00000416581 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
LINC01398-201ENST00000416581 ZNFX1Q9P2E3 1918 aaKnown RBP15.97■□□□□ 0.15
LINC01398-201ENST00000416581 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.15
LINC01398-201ENST00000416581 FDX1P10109 184 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 AKR1A1P14550 325 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 TDO2P48775 406 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 MDM2Q00987 491 aaPredicted RBP15.96■□□□□ 0.15
LINC01398-201ENST00000416581 KIAA1755Q5JYT7 1200 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 CLEC10AQ8IUN9 316 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 TINF2Q9BSI4 451 aa15.96■□□□□ 0.15
LINC01398-201ENST00000416581 LTBP2Q14767 1821 aa15.96■□□□□ 0.14
LINC01398-201ENST00000416581 TTC41PQ6P2S7 1318 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 CYP2D7A0A087X1C5 515 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 ATP2A1O14983 1001 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 RNF113AO15541 343 aaKnown RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 RAD21O60216 631 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 SLC39A5Q6ZMH5 540 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 PRPF38AQ8NAV1 312 aaKnown RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 XPNPEP3Q9NQH7 507 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 FBXO40Q9UH90 709 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 ZNF214Q9UL59 606 aaPredicted RBP15.95■□□□□ 0.14
LINC01398-201ENST00000416581 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
LINC01398-201ENST00000416581 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 GPAA1O43292 621 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 RASA1P20936 1047 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 OAZ1P54368 228 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 LRRC41Q15345 812 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 FAM83BQ5T0W9 1011 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
LINC01398-201ENST00000416581 PHF24Q9UPV7 400 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
LINC01398-201ENST00000416581 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 GSG1L2A8MUP6 293 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 F5H6K3 240 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 ZBED4O75132 1171 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 PDE4BQ07343 736 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 KLRC3Q07444 240 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 ZNF792Q3KQV3 632 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC01398-201ENST00000416581 DDX11Q96FC9 970 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 TSEN34Q9BSV6 310 aaKnown RBP15.93■□□□□ 0.14
LINC01398-201ENST00000416581 FBXO28Q9NVF7 368 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 MTMR10Q9NXD2 777 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 FEM1BQ9UK73 627 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 TACC3Q9Y6A5 838 aa15.93■□□□□ 0.14
LINC01398-201ENST00000416581 TTLL1O95922 423 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 NDUFB10O96000 172 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
LINC01398-201ENST00000416581 APPP05067 770 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 FAM47AQ5JRC9 791 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 SNRNP48Q6IEG0 339 aaKnown RBP15.92■□□□□ 0.14
LINC01398-201ENST00000416581 REPS2Q8NFH8 660 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 MKL1Q969V6 931 aa15.92■□□□□ 0.14
LINC01398-201ENST00000416581 PRDM5Q9NQX1 630 aaPredicted RBP15.92■□□□□ 0.14
LINC01398-201ENST00000416581 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms