RNA–Protein interactions for RNA: ENST00000416195.1

SP3-202, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SP3, Length 3,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-202ENST00000416195 PTPROQ16827 1216 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 WDR66Q8TBY9 1149 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 UBXN4Q92575 508 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
SP3-202ENST00000416195 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 USP40Q9NVE5 1235 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 USP17L5A8MUK1 530 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 GDF11O95390 407 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 HSPA1LP34931 641 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 IQUBQ8NA54 791 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 DACH1Q9UI36 760 aa13.22□□□□□ -0.29
SP3-202ENST00000416195 TFRCP02786 760 aaKnown RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 UBXN1Q04323 297 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 SF3B3Q15393 1217 aaKnown RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 KIF4BQ2VIQ3 1234 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 PPP1R13BQ96KQ4 1090 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 PPP6R2O75170 966 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 MTIF2P46199 727 aaKnown RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 CCZ1BP86790 482 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 LRRC41Q15345 812 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
SP3-202ENST00000416195 PAGE5Q96GU1 130 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
SP3-202ENST00000416195 GRAPQ13588 217 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 ALX1Q15699 326 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 PKN1Q16512 942 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 FCHSD1Q86WN1 690 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 GRAPLQ8TC17 118 aaPredicted RBP13.21□□□□□ -0.3
SP3-202ENST00000416195 TMEM60Q9H2L4 133 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 FAM205AQ6ZU69 1335 aa13.21□□□□□ -0.3
SP3-202ENST00000416195 CDK8P49336 464 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 UBXN2AP68543 259 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 TTBK2Q6IQ55 1244 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 SLC30A10Q6XR72 485 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 A0A0U1RQJ8 604 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 GTF2A1P52655 376 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 SEC23AQ15436 765 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 TOGARAM2Q6ZUX3 1019 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 ATRIPQ8WXE1 791 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 GDAP1L1Q96MZ0 367 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.37e-11■■■■■ 86.9
SP3-202ENST00000416195 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 GUCA1BQ9UMX6 200 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 THRAP3Q9Y2W1 955 aaKnown RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 E4F1Q66K89 784 aaPredicted RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 NELFBQ8WX92 580 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 CAPZA3Q96KX2 299 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
SP3-202ENST00000416195 XDHP47989 1333 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
SP3-202ENST00000416195 CALM1P0DP23 149 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 CALM2P0DP24 149 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 CALM3P0DP25 149 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 CASP14P31944 242 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.3
SP3-202ENST00000416195 TERF1P54274 439 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 EVCP57679 992 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 NCAPHQ15003 741 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
SP3-202ENST00000416195 SRPRBQ9Y5M8 271 aaKnown RBP13.19□□□□□ -0.3
SP3-202ENST00000416195 MMP10P09238 476 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 CASQ1P31415 396 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 MRPS25P82663 173 aaKnown RBP13.19□□□□□ -0.3
SP3-202ENST00000416195 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
SP3-202ENST00000416195 NELFCDQ8IXH7 590 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
SP3-202ENST00000416195 TSPYL1Q9H0U9 437 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 PDE4DQ08499 809 aa13.19□□□□□ -0.3
SP3-202ENST00000416195 KCTD19Q17RG1 926 aaPredicted RBP13.19□□□□□ -0.3
SP3-202ENST00000416195 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms